Naga_100018g9, gene3745 (gene) Nannochloropsis gaditana

Overview
NameNaga_100018g9
Unique Namegene3745
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:341364..348365 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100018g9
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:341364..348365 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03250NO08G03250Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3893rna3893-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3893rna3893Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3893

>rna3893-protein ID=rna3893-protein|Name=rna3893|organism=Nannochloropsis gaditana|type=polypeptide|length=2121bp
MPYLDLVDRRPLDWVEEGQIPQGWRGYWTPESLDAWYSARAEQVEANGGA
LGGNVMELINIGLARGCPEGGSTSRLRAEVWHFTRVVYAGLDTGESQEGE
GVEEGLTLQAWRKLPLRTVMRRILEHAPLACMEDTSSLVQLIEVYIWPML
RGPLAQVPSCQKEQQPALALQEPHMSGVPGDGEAALAEEVTDFLVTRILE
ARKERLAREADVYADQYEADEETVEAWHAAEVRAEVVLRAAVAVAQASKP
NLSPERRVLQREADLFRFVLQCSRAHDDCLDPPGAIDLLWSLIECLPVAS
AAAAPELQAEVDALEARLTVAQYLSNYSIAFPLSVYERFQMDLAGGSFSG
LEGSEADFRVLGTWEDVLPVAFRKGPAAVLDDHTPGKGSQICEDIRLDIQ
ILARMARYLAVKLQEMDEQQRQQQEQEKFWNEVGEDVRALQAGGIFYTLP
LYSWTQALVYAALKGVAKCGMVSSSPPRRALPPPPPPSTTVLASAMAGLQ
LPAAGLEPVVFQLLQDWLHEADGGLDHSVNRARALLAALPFSSRRCHKEA
QWLEAVVLATKLAGDKGWGKEDLTPTEVRAAAQGGYGMQVLLAILDTRPK
LVLTEDGERDLLRLAGLLGMEEEEVEPVLKFVTIKKAMALEEYEMAALAL
LESMPVPKLVGAVVELDEGRDETWAMDEEDVWSLVFALLTTRNIETKIPS
DLLRSIMHRALIAAPPHHLLDLVEVITESVLACKSFLLPSSGEPSNEEKL
QVMGLEDYKHSFSFVRNVKSKEHSISPLHSQEWDDVLLELVKSSLEKARE
VMWVPSKTYARNDKMECSPLSKANTSISFPPAVQEFVERALIYLLSLHDG
RRGVAWVRKAVSEAEKKAHEEAAEAGRRAQIEGEMRFAHEGAKKGGTVVD
EGSIVKQLLARGYSKFGALRAARAVGNKSADAAIQWAVAHSHDPGFDDPL
PAETSLRPSLIFHSSSSPPLPALAGLGNFAFPRPSSPWRDSEEVPEKEEK
ARKIEEPMLEAIRSLAIRYLCLEALVERNGTVSTPFYCASAGELLKHAMA
LPEPPPPPKPGASSKGENEESLHSETEVLGESLAQLCRRELAAYSQEAER
TGVLTTLQAFVPWTLDGVKVRIDQEYRTEAVFAAARQDDAQAWKAAMMAA
EAWGVEKGEVALAHLEFWFQGPLKEAWSKFRAAGLGEVISRFEKVALGKR
GSNGSEKQGSGTRAGAEIEQDLSALGSQWDPRSAGAQLIASTPEARHAVS
RLAVVWDALDGQAMSLLEVLSRIMAEITTVAEKEAGEHGESFVGIGKRLR
DHVQLLRRLMRIPNLPSTLNYKRLTASTPPYLTACVLLKRKDSDSEDTAQ
KASLAPAPTRDWLIQESYRELVHNVRRDNVTALSKLAARILLPCGPLSAS
TVNRAYAEALLRGLDPLLSDEEANLPLARASAEERFSHRAFVAEPYLDRL
ASSDLIGLLESVCMPRLEASRLAEREMRATPNEKASPLLSAGPCLSSVSD
RSLVSQKIAILYQSSKGKGGDTHVKSDDFECIQRIIALLEALTLCGGDAS
EDSRALETAWIEGTDVSPVLESMLVEGRGGGWAGLQTLMRALKRAAASPP
TSSPSFRGGKGFLLPQDEALGVLVGAVKHLLGAPLPFDKAHLVNLERILT
DSVAASRTHDMSLDNEEEDAGAQARWALIRPILEEFVAQDGAEEEGEGGQ
DGSTARALSPVQQGHQDRARADVVEIVLRLGTGFSLEGGNEAMVVYHRAA
EMMWEGLGRKLSRREAETVDGRVQALLAAMEGPKGLEKAGAETALALVRL
WSGSVAKGSGPLGLAVDWSRWVLDTREDGDADKTLPGEEAACDCETTLPE
YDVIYRRLTERALDAHKWNGASSLLLWSPWRYRGGDGGDREEEELAAKLG
DLQAPLALRLKVALSSPHAALRAEAVAGLPALLGDKATNSEEEATGGVPP
VSGSVHATPRPCLSSRVLVADETLLALIVCALFPPRPVKDPLTLLFSSAW
QLVADALLFLPHSPKASRVPPLPASVAFVAARLVIGRAHLHAGALVADAQ
KLHPALRTVEGVLSLLWTTLCSGTYHIRGETGGTLSDKGHERDQLRQSDI
KLWSQVREAAKKVLEQDETDT
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Synonyms
Publications