HMGS2, gene3708 (gene) Nannochloropsis gaditana

Overview
NameHMGS2
Unique Namegene3708
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:233023..237762 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100018g56
Gene biotypeprotein_coding
GeneHMGS2
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:233023..237762 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0009058biosynthetic process
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03590NO08G03590Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3853rna3853-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3853rna3853Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3853

>rna3853-protein ID=rna3853-protein|Name=rna3853|organism=Nannochloropsis gaditana|type=polypeptide|length=1360bp
MKTGFVDAASACSSQTGASKFVAEAAFGIENALENSLCFWLEYAGLTHEL
ALEWARPLLISGLVILVLTVVAWSRRLVEALESDRPNYTDVKGRLNNPTY
PTLASIKDDPSHYQPGSHNSSLYGGGRRPQNVGILAAEIYFPSTYVRQTL
LEKAHGVSQGKFTSGLGQAGMAFVGDREDINSIALTVVENLLNKYEIPRE
KVGRLEVGTETLVDRAKSTKTVLMSLFEASGNTDIEGTTVVNACYGGTAA
LLNALAWVESSGWDGRYAIVVSADIAIYADGPAKPTGGCGAVALLVGPDA
PLVIDPQLRATHASNTWDFFKPKFASEYPEVDGKMSKDCYLKALDDCYMR
FAGKQEEAFGKPFKADAIDYFCFHHPYNKLVQKAFGRLFFMDARRGKLKK
AEGWESLDPWISNSLEETYDDRDLETLLRGLSHDRFSKRVAPSCLVSMQV
GNTYTASVYMNLVCLIAQKAEALVGKRILVYSFGSGALATIFQITGRQPS
SSVNASRFTLAKIASAVNLMDRLLERETVTPEELSEAIRIREKNVNRGGF
VPQYSVSSLFPGTFYLEEVRPDFTRVYLRKSSTAPRIKGLFYPVHGSSKV
IMVEKVLTTPRDGEGEQIFSPFVRELELPEDEDGHEIISSCASSNSPNSS
IVSTPSPKKTASSPAAKRTETVLAPGHNSAYTCSTHSHAGNTRAFTFPSV
PETQALCLGSPSCGVSASVPTITRSSSSLQATTPLSTKSSALLSLTHEEA
LMSMLKASLTTAAAPPAHQHAKSPIVISGVAAGLPGKEREVFSATNLADL
VNGTNFITSLSAETKAELIDRNVVQLKKNPDGSSRKVAVDSDEKVMKLGA
QLGKFDLTLYGVSPAMVATMDTVVQVAIAAGLEALKDAGIVEGTHKNLAS
WQLPEHMRDGTGVVYATSFPALEAAVSEVMRFLHSKQKSLTQSKALLDSV
KKQLVATCGGWEHVGPEDKAAYEQLQKSLEADLNDPDAEYEFDRKFLFRI
LVLGNAQLAQIVGARGPNMQTNAACAGTTQAIAIGQDIIQQGRCERLVVI
ASDNASGDVLIPWLGSGFRALGAASIAATVAEAAIPFDKRRTGLVLGAGA
IGMVLETEAAVARRYAEKTGLLSLSLTRNSSSASTTSSASSLASRSGPTA
TISEQHIKDFGLALRIRLIDTQYSNSAYHGAALDQHHIAGELERFLVALE
KKFGITRQAIAREGVYLSHETSTHASDASSCAANEIFALRTCFGEEGMKN
LVILNTKGYTGHPMGVSFEDIAAVQILRSGIIPRVANLDEASTDPYLGSI
NLGRGGKYAARYALRFSAGFGSQVAFALYGHFGGEVSGGVRGEEAEGGYY
AGVHSTGAQP
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Synonyms
Publications