Naga_100263g3, gene3695 (gene) Nannochloropsis gaditana

Overview
NameNaga_100263g3
Unique Namegene3695
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:182625..191773 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100263g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:182625..191773 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005215transporter activity
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03770NO08G03770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3839rna3839-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3839rna3839Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3839

>rna3839-protein ID=rna3839-protein|Name=rna3839|organism=Nannochloropsis gaditana|type=polypeptide|length=1510bp
MSVRGVPQLRSLLLRYSDRDGSSRAMREYIGSRLVAFAQAHGHVKITTQL
KRNVHPVVQADYVFGDPKVVCVRRATTAEEVEKVILALRNTTGRKVKPLN
KPVVSRLPSVQVSVTGTALKHRKDGLWCFVSIKTWRKVVLMWLIRSPELT
NPFKCTKEISHGSHMCLTTMQPAEHTFYHIPLYFCMAPQKENEQPLLGEA
NAKGKKMSKEAEKAGGTAHADYVLLSLDEESKVPGPGGEHDGEADKAKKE
TVPLPPVPLKMLFYFADTLDVLLMCIGGLAAAGTGCIMPIFALIFSNTTD
AINTGSDEERRHNATKYSLYFLALAGVSMALNFIQSSCLATAAERQVRKM
RESFLKAVLRQEIGWFDVGSSGELTTRIKGDTLLVQQGIGEKLGLGIQFF
ATFVAGFVIGFSKGWKLALVMCSVVPLLGVSAAFLFSSVGKLTTLGQKLY
AEAGSVAEQAISSIRTVAAFTGEEKEADKYSAKLLKAQSVGVKSGRTIAQ
GLGTVLFIVFASYGLGMWFGAKEIVDDHEAHPECVEAGTCQVTGGDVLVV
FWSILFASMSIGQCGPQLSAVAEAKGAAAKLIEVVTRTPAIDSEDSGGQK
LDAVEGRVEFRDVHFTYPSRPDAPIFQGFSLSMAAGQTVALVGSSGSGKS
TIVNLLERFYDPQQGEVTVDGTEIRKLNLKFWRSQLGLVSQEPTLFATTI
AQNIAYGAATRDREKRDRENKAEEGEGSEAVDGVPMSAIVEAAKAANAHD
FIMSFPDGYQTSVGEMGVQLSGGQRQRISIARAILKDPAILLLDEATSAL
DSQSEKIVQEALDKLVAMRRRTTIIVAHRLSTIRNADVIVVLKHGAIVEQ
GTHEGLMAITDGHYRSLVRLQTIPGAKGGEERMSRASSAASLGSMRSRAA
SSNSLNGTAHAVPKEANVSENTGDTEALLISPKPRQQGGGGNPSIVVKGT
DTGTENLPKVKSRRLWGLSRPEWKWVMLALIMAVVNGCTFPAYSLLLSNI
VSYLYDPDTHVVREKGYFWAGMFPILAAVVAVATFTQLLAFTVMGERVTT
RLRDMMFRATLRQDIAYFDNEENSTGAITARLATEITLVKNVTGQNLGRS
VQNLVTISAAFIIAFVFGSLKMSLVLLCILPLMVGGSFAQMKALRQNTDL
SQDRVASAGAVAVQAISGIRTVTAFGMNAKLLALYSQALQRPMILGIRSG
LLKGFTLGVSQFISLSAYGLLFWYGSSLVLDSPADERGAAFQHMLRSLMA
VTMSAQSVGQNTSFLGDQAAANSAAARIFAVVDRRPDIDSSQEGKGETLA
KVEGRLEFRHVDFTYPSRPEAQIFHRFNLVVEAGTTVALVGASGSGKSTV
VQLVERYYDPQRGTVCLDGKDVKDLNVRWLRQHIGLVSQEPILFVGTIAE
NIAYGLSSASRESVIAAAKAANAHDFIMSFPDAYDTEVGDRGVQLSGGQK
QRISIARAILKDPAILLLDEATSALDSESEKIGECEGGGGRTTDGTLTRL
WRYGDGRCGG
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Synonyms
Publications