Naga_100127g6, gene3560 (gene) Nannochloropsis gaditana

Overview
NameNaga_100127g6
Unique Namegene3560
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:996873..999780 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100127g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:996873..999780 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G03780NO07G03780Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3696rna3696-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3696rna3696Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3696

>rna3696-protein ID=rna3696-protein|Name=rna3696|organism=Nannochloropsis gaditana|type=polypeptide|length=846bp
MGLPGVYAHGLYCHIATPIGNKPSRVCHTLDVAIPIQECPTHSTSVNHLL
QNGPGGPSPMPSISKAAASNKNDRDATSTVSDAVDMARIPEYIWLDLVDE
ANLEGSLLPGIHRRVDSSEEAIVKAFNVLDRDKTGNLSRPQFTEGLNRCL
ITFNGNSLPSDLPALEALWRATSSSEDANGFVTQETFGAVLRRLKLELLL
PPLVDHSLESSYARTGDGGGGAMAEACDGEHAASRAPPPLGHAGSKMTNQ
QHSMLGNLGMDESLLMKVFDFTRNQMYKRDLSEGNRFRNFFLGRQAPETL
LNWITVESHDYINILRLAVKYRIHSLHLEDVLRLETQKPKMTLQGGNYFI
VVSTLRLARETERALEAWLAENHDVVGVSTDRLGRRKRPFPIMLEESTGG
IFTTAPPKNDNAVINIRTPWRAVNNKTGTRMSMRRTASVLGGTTPSTPST
RALRPLSERIQSGTRRKGAEHLSVPPPLSFRRMGSMIPVETQESLGLLPP
PQQDPERPSPQEGKTVQGSTSLDDRENERRPGATVLHGKRDVSQQDGMGM
VPKVSFAKRTAMNGQGGVTDAPLQLSGHEESTWEDHFIDTSMPVEHPEED
GEEDVLFDHAATHDTSLPFAVDREDTFDIHVMLEVAEGMYHNRGTVEENS
THWLLHSILDYNVDRLVPIVEAYQIRVSYFQDMLHQSGANFGKGRTKMVM
DTKLDLLWLQRRVALSKPIIRQLIRIAPTELQLYYQDVDDHLERCLDGLS
GLSNMAQSIIDEAHNHREERINEILLFITIITSIFTPASFLAGVFGMNFQ
TSQGDPSMPELSWEYGYLWFWLWSFILSGGVLACVRYKVGNRIKWC
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Synonyms
Publications