Naga_100079g10, gene3541 (gene) Nannochloropsis gaditana

Overview
NameNaga_100079g10
Unique Namegene3541
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:947357..954844 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100079g10
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:947357..954844 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005515protein binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G03630NO07G03630Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3677rna3677-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3677rna3677Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3677

>rna3677-protein ID=rna3677-protein|Name=rna3677|organism=Nannochloropsis gaditana|type=polypeptide|length=2343bp
MGRTKARPRRVGSLFEHNEWVENRERQGLSRLDAALQEANEANNDFLPRS
AFAPCRGGAASGDVAVAPDAGRRRSGQWKGKVNHRDIEGMLNDYDYNMAT
GEDAEEGGDEDVEKRREEEEREEADGMEEVYEEAAAARLGHRHPRRYRSA
MVTTKVSADQAERLQALDGREETRKRRRLYREGKRVPMPTQEDQECSPLE
VSDEFQSHIRLALPVPAGEKELRALLVRRRSFSQAAAQDCRGRPLATVLI
PATVSARRTLRVSLAENMATLVLEGDAPQLLGVKDCESWDLLQSLCEATP
PFAYYEAISDGRAVHLDIYLTARTLALASPSNEPPVKSVHLKRLRRLLEL
FFPAVLPELSTYYKPFPITLGTPAEPGGAGKGVIEEEESSKRAVPFDPAD
LYRCLEEYKAARLVQRERLPCLVQQSQASPNQGQAREEEPSVPGLKVTLR
PYQARAVEWMQCREQARDYFAPRAPSPSGSHAENPEDDMDEENLLGHGWI
KLLLPNPVPDPSASFVYYNPISVSLSHRWPVMWEPRALKGGILADEMGLG
KTIEVMALVLSHRYLGGEKAAKEAKGSSLGCHEKRGRGNPEKGGNCAPMH
NGSPNKEAISLDEDRIVKEGDGNDGGGGNPGREGSGGKDRKRGHDERRHR
GRAEEGLVDRTEYVCPCGRDRRGEAWLQCDACKHWAHVRCAGLSSSAEAE
ALPAFVCEVCHGLERFQSPSPVPATLIVTPQLICGQWEEEFKSRIQEGSA
QLRVVTYRGVAETSRSWEWEERRLLDPDVLGNEYDIVLTTFDVLAKDLGH
TDSCFLPPSRGETGRQLRNRKKYRVQPSPLASMVWWRICLDEAQMIEASA
AAAARMALRLKTVHRWCVSGTPIWKGNLDDLYGLLLFLQVSPFDRRSWWR
HAIELLHEKGDPDAASRLHRLLSAIMWRTSKKSVLDQLALPPQTERTRIL
HFSQVERAYYQTQYKECIGKVRDVVRKIKRMQQQQQQRTSGRAQELTKRK
LSATTALESCAGPLLRLRQACCHPQIGAGGLGGLRKGRGIMTMQEVLEKL
EEDEKLRCEETQRLLMMELSGLGSMARIKGELWERERGKQRDESEKDTKG
KGTPAKASTSPSAQDVREEGNARESDGRSKAHCTKKAGQEHGGISGKLKF
LMEAASYYEKALLTAERNRQPVPIGGVEGLEGAPRFKGRESRDVDAGNDG
RMEGRKKQWTVINLEWEMKQELKEGNTVEEGVLDVDAVRQKISQNEDLHP
ASTWTATELSPLWASVTFQGGNKKIMGLRVWPLVNSEDSGGEEAQTKVED
LVYMPGKCRLMACCSPEGALFVEAGVFDLKELMREEGDKGTGKEGKDGGM
GGKLILGFNMLAAKTWKLEVLDVIRSEGRREEGKEGGIIKTGMKVQLLVA
DIEVDPLQILHVTTNLHRVFKEIKGIAGGEVDSGSHSAKIVSSLLSPPNS
PSPANEGVTASTQAKHEQESERLMSTDVGVMVRRYEDVYQLHIAEKIEWL
DARVRAVTQRECNLARLMHQANRQHFASASQALDALDGEIDKLRKRGGKA
AGQGRIVWWEWTLNELMVRGDLLDPKADLLRRLKVESSGPQFPAFHDYHG
LMMAIKLKSKDLDETRTRVNALLRRVLVDNPSEGERQRNSDCGVCRKDWG
KSGPLCHICELEKHLKAYEEKLHAYREQRQQNGHTVGTFKHSCCTHRLLY
SVLLPWLRHQALKRKSNPEWQHAWEEAMVDNRKEELLERERKMAKRFWNS
GFDLLSKLDEVACSALSLELAQEGEIFKDMSSEQRKLVVFPHEVDVKKEE
YRMQVAKYEVELRERKGYLKYLQNIAKNEARAAERNAAMARKMQKEVKSS
ASSERKDGAFREGPRIPTSIDPCASSGILQGNDEEGEEDNVNLCFVCFEE
YTVINPREVLPCAHHLCKTCLRQLLGKRAQNKCPKCRRNFHRKACAEVQE
SREGECKDMEEDRKDIRVGEDELYMDEAVQEEGDEEEEEEEEEDDEGPRV
EGSWGTKITALVSEVLRLPVEDKCLIFSEWDEMLDIVQQALQTNRIDIVR
LKGERTAGRVRQEFRENESVRCMLLNLKSGAKGLTLVEANHVFLLEPIFN
AATEAQAVNRVFRIGQTKPTVIHRFVVRNTIEENVEKMRQSKVAAAGGES
AVLSAVKKQGKTRKTDVELDVEEMEKLFATTPRVIRRSIMSSPDIASGAT
VDRMASSVGGGHRNGRRPWQRKINMDRAGEGSSLSNLVNVRRYDGGDGEG
MATEEEDGTSGAVECATSDSSGQDGAVRAVQAGTVQSGGENRNVDPHTEM
IVDNNNFEEREVTRGGRRLGGAAVAGRGRGCSRSVLLRQSDGI
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Synonyms
Publications