Naga_100079g9, gene3540 (gene) Nannochloropsis gaditana

Overview
NameNaga_100079g9
Unique Namegene3540
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:940620..945811 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100079g9
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:940620..945811 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G03620NO07G03620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3676rna3676-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3676rna3676Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3676

>rna3676-protein ID=rna3676-protein|Name=rna3676|organism=Nannochloropsis gaditana|type=polypeptide|length=1290bp
MGWLSFGGRRRSCNLMKLPAGVDRQQQPSFPIMLRMLLLAFLVSFWATIA
SGRQATSGRGIYSAPFPGGRLRHEGHDLPAFQTPWLPRPMRRQEPRQWVP
PKPVGKRITSMTERSAGGAGLLKNLQGLFKGASMTGAGKPKSLRLPTIQE
VHQAMLAPEEAPTRLAELMQTDLPEHPGLKKGVLPNGLRYAILRNAAPPG
RFDAFLEIFAGSADELESQQGMAHIVEHISYMGSRKRERLFGTGSQTNAF
TDFHHTVYFACCPVDTLNLLGRPRPMLPMALDALSEVLEARFEESRLEKE
RAAILSEMSMVNTMDYRVECQILAALHAENKLALRFPIGKEELIRSWTLG
DVKAFHRTHYRPDNAHLYIVGDVDVGQAEEMIRKYFGHLEAGGREQEPPT
LKLQSRHFPPVTHYFSGGKFDRFADASLPAELKTFGRSPRTSEESVSDKA
DGNAARDLTPRIFQHENIQAFSFHLFAKRPIEAVQTLADYRRSVMKRIAI
LALQIRLNVLARDDPPFTFIEFNQLDSAREACAVCNLDVLAEPEKWEKAV
SLAVREIRRLGMYGLSESELNRYITAMLRDSTQHAAQGERISNSDQLNQL
MESIACGHVFMEPTQQCDAVELVLKSITVEEVNEVAAEICQHLTDYASGA
SSPPSACVATCPSLTRDRATGVSRPFHITEGEMLRVIEAAAREPLEPNNE
EDMEVPDALMPPERVEAMVAATKPSWKDDVGLHPSYEPQTGIHMKRLQNG
IRFNYKVSRAESHRGCLSIKFPGGRMLEAKDKPGAVAVGTRTMQEGGALG
PWSREQVELFCVDNLMMVEINSSEDWIAMDFTFPTKSVSDGDDFSFASAA
LRGSVGAEADGGAGGDPERKAAVTGLEAIFQLVHLIMTEFKWENDALQRA
KKLYAQGHDMTVNSLEGAGAEEISKSMWDGDLRFLSIAREDIEDLTLEDV
KEAVMAQMTTDATEVSIVGDFEGEEVEELALKYLGSVPESRRADGVGVRE
GMMMPLPPMVTDPARRFMQVHLPDSNPRAFVYVSGRTPNRWGYMPSSTSA
TGALPAGVTTGNEEPRRLVDYLAKVAPDADEAAKVRRHQPGFPFVSLLLI
QEIMNRRLFSNIREKKQLTYDANFRWHPYDLYEGGWYSVQIAASPENAPQ
VLHACLETFEELKTDSPISHDNLDSAKKVIVNKHNNEAQLNRYWTDLMSG
IQLDALPTKDINFVRDFLPLVQSITVKDLQLVLGTIQLDESKICTCLAIS
ETTGPGGNEDVVEDGMLMPQHIKPGGGYASTIPLAAETGR
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Synonyms
Publications