Naga_100309g2, gene3526 (gene) Nannochloropsis gaditana

Overview
NameNaga_100309g2
Unique Namegene3526
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:908579..912837 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100309g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:908579..912837 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G03470NO07G03470Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3661rna3661-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3661rna3661Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3661

>rna3661-protein ID=rna3661-protein|Name=rna3661|organism=Nannochloropsis gaditana|type=polypeptide|length=1215bp
MSANNNAKPAVKKTRFHKEKEEREARKRQEDAEAAKIYEQFVASFDAGDG
NGNDGKRFVRARDGSRRGSSGKGRAGLADDGPSHYQPQMPVSLASKAPLA
PLPTAAFPSHTSATAADSTRTTSASGSTLGNRSHGGGSSGPALVPGLASA
NSKKGPRQIDAFLEELKQSQESGVSKEETCPREGSLDDGDPHTTNLHVGN
LSPLTTEERLEAVFGRFGRVYSVKIMWPRSEEERARGRNTGFVSFYTRAD
AEDAKDQLQDFLLDDHRIGIGWSKAVKKLANLSPSTLVSPSALPPGLSLP
PSALHAASGPEEEGRSLKGSGRRGGDGGLPGAGLTTALQAGSGPAGAEGE
ATGRLVAADSAAAGLGQGSSVRPPTSTSSSASSPPSSLSSNPLEEALRRA
TSISSRVVQEPSRLDDGEDEGRGRRGGRYGRSRSRSPEGEPGRRKEGEEE
EKEPGPGDVVLPVLFPEDKDVEFLISRTARYVAKDGGPLEERLKVTESQN
PRFRFLWEGDSPEALFYRWRVFSFLMGDTETRWRVRPFQMTVDGPFWAPP
AIPGAWRDRREVKEEAKEEKTSDYGERGREKGRDRGRSRSPERKKEAGKR
GRSRSRGRDRRQSRSRERERGGRHESRSRSRERSRSRERGRRRRSRSHSA
SRSRSRSPGGSRRGGGRGRVGAPGDEGQEAVMPAAAFLTGRQAERARDIA
RGRAPSSRLSRKDYETFVALLRALDGGRAKIKEGMGFALDHADASEEVVG
LLKESLCAEKGWSEDLAGEQPVSLSRRVARLYLVSDILHNSSAGVRNAST
YRTSLQLALPYVFSAFHNSLAVLGRLTAQHVEEKLLKVLKVWGEWSIYPP
LFIAGLEATLTVDLEKEGEEKEGEEEGKEEDLEKGRDALVRQARQAGLTT
EGPLVLLLRKMKRLDEFVKKKAAGENRLEGGRWTGGDTRGGRGARGGEWE
AGGSSASEMSRYGPGASAAPLRQVEEEEDEEEVDGTPMDEAATSIFSSKY
GWARGDDDQDSEGEDVDGRPLDLSPLPSGARAPGQSTRPGDRSGRAKGAD
KAKKRGRTGEATYSSSSSDDDEDGGRTISIGQALGTGPLGQEELDRRPHS
HGKYQQKPPPQWTAQEEEARRAMLRSLETGLLHFRDDLEAKGENVESIEA
AVQERRQAMVSTWETQTLAQRKGLGVATAVAVERSAVITSRGKGKVDALG
AGRGSGEERQAKRKR
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Synonyms
Publications