BIG1, gene3414 (gene) Nannochloropsis gaditana

Overview
NameBIG1
Unique Namegene3414
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:654590..661395 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100010g105
Gene biotypeprotein_coding
GeneBIG1
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:654590..661395 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL134ngnoL134Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL131ngnoL131Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02090NO07G02090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3544rna3544-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3544rna3544Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3544

>rna3544-protein ID=rna3544-protein|Name=rna3544|organism=Nannochloropsis gaditana|type=polypeptide|length=2057bp
MEKLVLLSLAKIRKLVSNARKHKTLRDACDTVIEHLQAKGLREEAVNSSA
HEKADLNYETVQRLDPHGYTPRTDTDADKFFEPFKLACETKIPKIMEAAL
DAIQKLVAYGYLRGTAIVTFSGPGSAGLRRPAGAARVEGATSGGDGTGAD
GENGAAILMDVIIQTICDCNDQSEDAVQLQVMKALLECVISNTTQVHQAS
LLQAVRTCYNIHLVSRNPVNKTTARATLTQMLSIVFQRMESHDLRAREEA
QLALQAMEQSVGRAGDCATFSLSPGKGPLLSGIGTPVTLSPLRSQSAVSS
PRAPLQPPCGENLYPSVYLNLGFAPRLLTGGDADTPSMSLARGMPDFPSV
LHKDAYLLFRALCRLSVKGHYNDGDSGLPADPLALHSKILSLELLLSTLE
RAGPTFRSSEKFVYLVRNHLCSSLLKNATSSNTAIVGLSLRIFIAMTAHF
KDSLKAELDVFVSNIFLKLLESENSSFEHKLLVLQVFQNLGQDPRLLIEI
FLNYDCDLGATSMFSRIVLALSKVAHGRGQQAVAGDGVLNQGASRRLQEE
MALRSGGLEGLVAITKSLVKAGGFDDDAATAKRAALGASGEEAHGLTPTQ
VGEATAGVDALGVSATTASGSTAGSNVTGSEGGEHPYPAPSSESLSMVES
YDRKQKLQEEVSLGLLKFNLKPSQGIAYMEAHGYLRKTPAEVARFLHDHK
DRLDKTVIGDYLGKEKDYESGFCVKVLHEYVDMMDLQGLEFDQAIRHFLA
GFRLPGEAQKIDRIMEKFAERFCLQNPAVFPSADTAFILSFSIIMLNTDL
HNPSVREDRRMTKDDFIRNNRGISSGADLPEAFLSRIYDNIKRSAISLKE
DDDMRAKRGAGGVGGGASENPFFSTLSLDKRRKEAYQKEREAMLQASEAI
FRQRKRREAGGGQASKKNGNGGRTGNTGLVVGQGVGSTVSAYRSLEDPAQ
YVRPMFEVAWGPMLSVFSQTVKTSDDLRMISLSLEGFRHSIRIAARFNLP
TARDLLVNTLYKFTALSEVTEVKPRNIDCIKTLIAVALSDGDYLNESWFD
VLQCISHLARLQLFASGLHSDDVFFPEGSVSGGAIGGVGNQGGTGNGTSG
GGAAFPPQRPRKPGGSSAAEGGGGGGAFVGLRGLFSAPSKAEAARQVDEF
NAEQIMGAIDAAMIERVFTTSVALDSQAIQYFVLQLCEVSKMEVAVAPTA
HHGGGGAYRPSQDLLGKETALQPRVFSLQKLVEVADFNMAARSRLVWANV
WEVLSRHYAAVGLHDNVAVAMYAIDSLRQLSMKFLAKEELRDFNFQRLFL
KPFEVIMATSRSIEIRELILRCLDNLISVRAHNIRSGWRSMFAVFSIAAS
SPDEGLCQFAFDIVDQLFRAHFQFLVFDFVDLVHCLLAFAENDNHLHVSL
AAIAHLQRAGSLLAEGVVTAGMTTVGGIATKKNSPRSIQGTEKFFEKEGI
SDVASEKRAAEISASPSSGSGLATDFSDSPGSVGSSASTEAVLQLWWPLL
VGLSARVADSRLPARTAALEALMNTLRQHGGQFNPQIWKLTFRGVLFPIL
ESARTDCTPQIISEFPSLDPSLEVYEDSWILTTTESVLKAYVEILEAFWP
LTQALMPEVLAVLVDCACQHERETLARISARVLHRDIVEGLAARIQEPAV
WDALSSCLLGLVRKNLPEWGSLELLASAGEAGAKGAMSSRGLTPSNRATY
AGTRENGARGDSAGSWHEAGAIDFSSPTDDMGVEEEENDGDEAGEAEAAE
RMAATGGRPGRDFSFSFAMVNNGTIMTQMVVSLLAQRMLRDLLATAWPFL
NEDNLRRVLDALVESADYASEFNMNLSLRERLRQGGLMQLPSQQNLGEQG
QLVCSRTGMAEVGGCVHASRLPHLHEQAIEGYTVLLRALLQLYPPTTSQM
AADVGGLTWDRKPVVERVLVRYAALVLRQYVELEDDLASSREGKSAASVA
AAHAMNTEVGAYTPLVLFILSAFKSLPSKQFGWHIDWLFPALVELLTVRS
REVRKEVRAVLHTKVSPFVLGKEMLPPGPRAAVVAALLEEEDDKGGMGEK
RAAMDEE
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Synonyms
Publications