Naga_100010g101, gene3411 (gene) Nannochloropsis gaditana

Overview
NameNaga_100010g101
Unique Namegene3411
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:641071..646603 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100010g101
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:641071..646603 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL134ngnoL134Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL131ngnoL131Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02060NO07G02060Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3541rna3541-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3541rna3541Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3541

>rna3541-protein ID=rna3541-protein|Name=rna3541|organism=Nannochloropsis gaditana|type=polypeptide|length=1658bp
MASIDGSGKPDAPGDQLVEKEREVQELRRILEQERALARHWRYVASHAAH
QNELPIKASSPSIDGHPGTVLPTLTVSEPPPRKSSFVALPLTAPTQLEGA
TGVNDEKNAAGGILTTSELDLKRLMGTSVIREIGVENHFKNLASTLGESR
RNISSTSVQIQDLSLSYMVEQSNKRFLNVGEALLNPFLALLRSGGKKQTF
QLKALQHITTAFAPQKMYLVIGGPKCGKTSLLKAIAGRSLRGTGYRLSGS
VLYNGEEAGSGGFHMTSLACFVEEVDNNEPLLTVRETLVFSGACIAPVPT
RKLLQTDYGRALVESLDVDEATKKELRACRGVGRPKIRYALARQKAETVM
TLLGLQGCADTIIGDASRRGVSGGERRRVTLAEVLMGEYSVTCLDEISNG
LDSAAAFDIVRMARASVQAFQYCSIIALNQPAPEVLALFDQVLVLRKGAL
VYQGPPDEAKGYFEGLGFRCPPRTDVADFLVGVTGPAFKSFRASLDELAE
TGISPAQVQWPGSTKDFVQRFRKSEPGRHLFQEATMSPHKKANSSIKTES
SDSGIRRILEAAWRENEQRKFYNTWMTSFVICFHREFKLTFRDRSYVVSR
ILQDIFLGALTGLVFLNLRTEAVATRFGALYQSLLTIAFQTAACIPAYFV
RRHVFYKQKNAGFFSCSSYLLASTTASAPLVLLDAVLFGTLVYWCAGFAR
DQHGLHFFVFLAHLTMVGWAMMSFFKLTTFLTANLTSAAAASGIVTFFLL
LFSGFIISVKDVPNFYTWVMFLNPLFYGFQGLAVNEFIAKNYGALLPGST
ETIGETVLGQKGLFTNARWVWLGLLANLGITLFYLCLTLVAMMYLEWLQP
VSSADTTPEEAIAQSSLALRGPGLLRRQTTERHLELDREESDVDEDGYSW
TSESVQSWGVESSTNTITAFRSFSGLGGGAEDDEDASSTNTSERGGARQG
VMGSSVDEETKEAEGLAKDDARGVKFSGQVAEHTYGKETVRPKNENLAHS
VLPRAVSSVKLLADLRNGKSSTWQLEAVKAIPFVPTALTFENLWYSVPVN
GNETVDLLKGVSGSVAPGCMMALMGSSGAGKTTLLDVLAGRKTEGSIRGE
ILVNGVPLSSDVFKTISAYVEQFGCISPYMTVAEALQFNAELRLPKEVSA
SKCRHFVGDVLTLLELDPIANAVVGPPGAGLSFEELKRVTIGCEVVANPS
ILFLDEPTTGLDARAAFLVVRVMRKLAQTGRAIICTIHQPSKEIFNFFDS
LLLLKRGGQTVFCGPLGADSIHLIDYFRSIPGTPALDPGENPATWMLECL
GAGTGIGAAVTACNYVAEWETSALCASNIETLRTLTQTPSDAQQAVMASL
KTRERASFGKQLLVCLRRAWRSLWRMPEYQIARVLGSGVMGLILGSLYFR
QTQDTVAGLVSFMALLFLATTCVSNINSTAVLQVVALEKTSFCREHYNRM
YQVGAYTLSWFLCEIPWVLLQTLLYSATFYPTCNYNLAPWRIGWFFIFSF
MYLLFSTAFGQAVAAVCPSVQVAQILLNCLVPIFSMMSGMVIIPEDLPGK
WKFLWVLTPLNKVFEGLVVTQWGNDNQGSIGFFSIKNKQFEELTRWEFVK
DFFGTFALEHRFRNIGVLIAFTEDWIMHWQDSQDSSHEELHYSDGGLRDV
YKTIIGDL
back to top
Synonyms
Publications