Naga_100010g99, gene3409 (gene) Nannochloropsis gaditana

Overview
NameNaga_100010g99
Unique Namegene3409
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:635389..638422 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100010g99
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:635389..638422 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL134ngnoL134Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL131ngnoL131Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02040NO07G02040Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3539rna3539-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3539rna3539Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3539

>rna3539-protein ID=rna3539-protein|Name=rna3539|organism=Nannochloropsis gaditana|type=polypeptide|length=805bp
MNQENDDGEAEEEHDDIRDEADRSFLTHVHGTLLSSSLAGGADCTSTSPA
SKVIVHIDMDAFYCQVEAGLDPSLKGKPIAVVQYAPSGDLSTQTIHHDRR
VSQSNQSLIAVSYEARARGVKRIMLGDQARAVCPDITLVQVCVAHKKADL
TIYREAGAKVIKILARYGPTERASIDEAYVDLTAMAQSRLRDFGPDMIVR
ARRESKVAGLEGQKEQATLTREDVRNGVLIGGQVRQDGSTKEERRGSSPS
VSRTGDEGGRVENAALTIPRAGTAWIGRDACMAQPSALDDLIQYSVALSC
ADEPGQARASTSASTTRAAAAWWERPLQAWTRSEKEMVCGAAILSEMRAA
VTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVA
RLKGLGGDFGKKVMEDLGCSTIGEVVERPLSRLEALYGESDAAWLFKLVR
GVDDDSVEDRRLAKSVSCGKTFFGNNNLREMEQIHRWLRQLAGELTQRLR
RDAELHARIPQLLTVSFQSMGVGGHHQNASRSAPLRLSIEQLLSVDAEET
VEKGTPSAQMGGRNDVQESLADQGLSLVRRWHKETAHLSKSQHTLCLSTL
YLTASNFLEIKQKSRMTSFFPKFGANSTHSAVDSGSNSKATAPPEYSFSD
SKSSSPCAGAGDLSTDPPPAPCESFFKASRSTPIAKQGSPVEEIAETRKR
QLDGETAAKRESTNMGGLDPTVIDPAVLEELPPHIRREITDGIAAATASG
KRNKFSSRSAPNEKKIDTYFPKGGPHTGWPTPARPPPSSLSVKRGTLDRF
LKTTK
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Synonyms
Publications