Naga_100010g67, gene3378 (gene) Nannochloropsis gaditana

Overview
NameNaga_100010g67
Unique Namegene3378
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:569605..577901 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100010g67
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:569605..577901 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003723RNA binding
GO:0004518nuclease activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02160NO07G02160Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3507rna3507-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3507rna3507Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3507

>rna3507-protein ID=rna3507-protein|Name=rna3507|organism=Nannochloropsis gaditana|type=polypeptide|length=1747bp
MEDEPPETRLRNYQQEALVKARRTNIVMCGAAGIGKTHVAMSLLREADYS
DGKVAFYLATTRHLAEQQWQRICNGTALLTKLCVGMEYDLLSKSQWQTLF
RQNQLVVCTPQILLNVLDKGHDYITLQRINLLILDECHKARRNHPYALLM
HQYGRGIGKGPLPRVFGMTATPSKNCHQILHCALHVCPQEDVKKFAAKAP
LKVIFYKEGNHISWEEQMRWEEQMRKIKEFGAQREFSLSGMTEKGTGIPF
KCSKGMDESSYLAISDYSENFVDDGFHENQALQIQFDDDTFKMSSEIGKI
LKEVKSHLPSMAKNKSLTEKILWRTYNDVGVWFGLRHILLGLEHWIGTVP
SSSAERDVEEGVLARKLALYLKEVLPKAVKLRRIRLLDRVEKLIQCLHER
WQQDRENFRALVFVQRRTTCRVLYEFLNMWDSFAGLCGFVIGQASASGLT
TFGLKRKYKRAIKEFASGKLKILVATDVLSEGIDVPDCSLVVAFDTIANS
TAFVQMRGRARQHNGGAFVLFASDQGGLERLFDLEQGAALFEKDVDDMEM
SYLERRDMSFAHFFPQFSYAVPATGATITLNNSISLLTQLLQWNKDCVSY
QLLPTVEYSERVVSGEGVMFKCLLTLPDVFGLPVFESSFFPAKIIARAVA
AYHACIEFHRCGFVDDDFNPVRESLQLEAYEHFIPEFYGSQVVNERLEIK
TQAFAHFGVGPVLEHEASAELSTDLSAGSAKTSLEKETQERVNSGTTRVA
TDAASALGLTLLSGKTDRANHYVYRLSKDAGCVGFITDTLLPESSLRAED
LSSTPAQAEQLSVTEVQLLAQCHVAMLFFVIHGASAFNIEFGPILQIDKG
CNSLGNCDETRQTGEKTPPAGGAEKGIDKNNEPCDGSDGLQPDVDCDMAS
KDKNGRQYPQSCSTDPARGKYEDAREYLIPQTHLEQSRRKWSGRCTGIDE
VEGHGKDWFAKCMMPKAAWDKGYVLVPIKPNGEIDWVLVKTLAQSSPSRH
LVHGRGDYWPLPSFDAASIHNDLLLTCSPLTGRPKLWGPIQIVEQKTLAE
ERKARAAQATASARKRNLLEEDKDGTVGNPSVFEMSTAGKNTMPAVDNGL
PGNIDQGPRKKLRSGQDRDIISLEREGCSQDEVENGPAVNDVSRGDAVER
RAMQSDDLLPHLHLSEYPVEIWDRCDQQQPLILVEKILDSSYRFRALSRD
GKFGENDDNEPRSEMQRNTISRRRLVAPQLCTLIRIPRSLYEACQAALPQ
VWRLEIALKVESLIQSVGIPVKDSSIIREAICKPDYERLEVLGDIYLKWV
MTCVVLRKEPYLLRESLLHDFRCNLTCNRRLVRAALQRGLDGHIVLRAKV
VNEPYRHWAPSLMAPLAASASEVNVKVIADVVEALIGAYLLDGGPRAADA
FLRWLGLPVMCERDVCQQQRSSMPGLSDAPAAFFTAGPPPRDRVKLQKAY
WPLLHRCCQCWKEESLANTPQNIHPKAVPKPATDLVLKVTKLENFLGYTF
RNKWLALQALTHPSHSQKHRRSEKGQGHTIFISDYQRFEFLGDALLDLMV
MVQILYENPDSPPKPLHVEKGVTVSNEHLARRALEWLQLHRFYDSDSIEL
NRCVETYANDAIAFAQGIDEWNPSKNGSGPKALADVLEALIAAVFIDTAG
NIEHLVEIFLPRLRRKSAFEEAEDSRDARAGLAMEMQWKLQVSSIHELTV
ELREFFPILIGTCRRELALEEDDLCRESLVKELTKSIPVAQGSEEVS
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Synonyms
Publications