Naga_100010g49, gene3366 (gene) Nannochloropsis gaditana

Overview
NameNaga_100010g49
Unique Namegene3366
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:542399..545383 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100010g49
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:542399..545383 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL135ngnoL135Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G01840NO07G01840Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3495rna3495-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3495rna3495Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3495

>rna3495-protein ID=rna3495-protein|Name=rna3495|organism=Nannochloropsis gaditana|type=polypeptide|length=807bp
MPSCTWPTSGWYFLLFITSNITLKYYAKQFESAFSLQALIQWVRNLSNCT
DEIGLCRTSKRISKRMGGRKIIDTIHSVLAEGGTTLSLEFFPAKTEEGMG
NLLARIEDMVARLQPTFVTLTWRSAFADESLWLKIGGIVQREFSVDVLLH
LTCHLPRADLVRVLQNARDAGIRNILALRGDPPIGEDRWQPVPGGFSNAV
ELVHLIRELHGDHFCIAVAGYPEVHTECWNSPDLPPSEQSFAQDLTFLKD
KVDAGADLVITQFFYDVPKYIRFHDKCREIGIPAHIPILPGYLPIQNYAS
FRKFTSWCKTSVPNPIDKALEKVKDDDEQVKALGVQEALRACRQLLDHGH
RTLHFYTLNLESTVTSVVEGLGLLPKANLRELSWQRHKASGNRVRAKGGP
AEEVRPIFWANRQTSYVSRTNDWDEFPNGRWGDSRSPAYGELSHYYLEFK
RPKVDRQKLWGIPTKHEDVYNVFVRFLDGKVGSLPWCEQAPAPETSAISS
NLKFLNANGYLTINSQPAVDGRPSTDPEVGWGGPGGIVYQKAYVEFFCSP
DKLKVLMEEMDRHPNLSYHAVNVKGQEYTNTRSARVNAVTWGVFPGREIV
QPTVVDSVSFGAWKDEAFELWLTQWATAYQEGSLPRMLIHEIHDTFYLVN
IVDENYGGDKTAVAETEDAVRLEHKSEGNDVTRLEKTVNRHLDIFSLFKC
VITRGFTSEQLFHFASETQRESEHLYAVVKELKAINHDTANENRMLRTSL
MQTQQEIADIKSELKRLRIQRGLDLIKPTTGFLHSGQHAAAGAITPLVAS
NTICKNA
back to top
Synonyms
Publications