Naga_100038g5, gene3287 (gene) Nannochloropsis gaditana

Overview
NameNaga_100038g5
Unique Namegene3287
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:355886..364862 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100038g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:355886..364862 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3413rna3413-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3413rna3413Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3413

>rna3413-protein ID=rna3413-protein|Name=rna3413|organism=Nannochloropsis gaditana|type=polypeptide|length=2674bp
MLSAPIFSQIRLLVNNLTKGNYAESVQELRQLIHLYGEDTNGFLLKYLIE
STRVLQLEEQQTAQSELNTARDEQLVLLAEELVTSSQKPNFVSIITQALG
LNSPTSIAGIDQHFVVASLAPTLKLDPSQSTALSVGLSRVPSSQVAQEAY
KILRARLQELLASAASLPSTTLGGKNTLTLGDDVLHALLVVLRSNEEYIS
NPKAAQTLLKMLKNTQPEATSALSLLPLLDAENHDPADLTTGTPTASAAT
SRLLAREAENMTNAIALSSHIAGFVQDLGPVCTASTEAFRETLKESGVAM
DERQAALLLCLVVDRHTEHDNEMSAMAANELLPSTASTTASGNGRGNEGG
EVDTGNRESASPRSWNLDVMASVLAADYSSLDWARVALELDNPRLFIADQ
EALRNLLSLYQRAASNRPFPLGVLFRPWTNKVGQLSFIHQAIAAPPDLVS
FSGIGRMQNPLDDTQIPQGPPNKAWLSIDLIATLLSFSETSLWYSARTLF
DGPLRQCPEILICGLACVEDSWGKLRSELLALLGPLYFQPGRSPHAVAVI
KRVHQTNPKLLVETLVERFRQEESAAVVRDILAVMLLVPSTQQDVLSSSC
TEFVVALAAAAADKEQLNLEKFIAEKLSSSTNKENFARGTLSFVHKHAGH
ARLRSAVVGNDVPPVLLSEESLVSLLKVLGQDPDLRQGGSQVAMEVKQAL
ELYSKRFMEVGSANQGAGAAPGGGGSAGGGSGSDAIEEMANAYFQKIYTS
EQSIPDVIEMLKRFKSSKDAKELEIFACMIRNLFDEYRFFHKYPEKELRI
TGILFGSLIQHQLVSSLTLGVALRYVLEALRRPPGPGNAGKWYRFGMFAL
EQFQGRLHEWPQYCSHLIQIPHLRQNHPDLVLEIERAMSRQSDQLMLPNA
NELNSGLTGASSLTGSPQMLSQQQQQQQQQQQQQQQQQQNILAMMRKADG
VGQEQQQQQQLQLLQLQQQQQQQLIDANFLGGTGTPSFIDQLQLQQRQQQ
MLQQQQQQQQAQQAEQQAQAQSSQLAFQQSQQPPSPQHRSSPPTQPGQQH
QQQASPLQHAQAQPSQISFQQQQQLPQSPQQQSHLSQHKQRQQLSPNLHG
GNQSLLQGSLGLSLGGSGLENGGSSLASIQLQQQQQRQAQAQDGASPQQG
ALLEGSPTLQAGLAPLAPSVTPMLNHLTQQQQQQQQQQQQQQLQTQQQLA
EVMASPPLPPAAEPVDLDACINHIMPGVQEAILQVQPPEIVLDRIYFVIN
NVSVNNLDSKAKELKDVLKEEHYPWLANYLVQKRISPHGNLQAMYLTFID
KLKAPSLTKWVLLHVLQYVSKLLRSHKIISSTGDRSVLKNLGSFLGQMTV
ARNRPLLQRHMDLKELLYHGYETGRLFALTPFVSKIMECTRGSKVFRPPN
PWLMGLMGVLAELYQVDDLKINIKFEIDLLCKSLDLKIADVPFSNTLQGR
LQPKKEKNPDFNVKVGLTSTPMMSPQQGGMAGPELGAPGVGGGGGLGGNL
EAETSIGRGTDGGEGTFAEETVIPNLAAYVVVNPQVALFTQSPHLRRLVP
LAVDRAIREIIQPVVERSVTIACITSKELIVKDFAMEPDEKKMGKAAHLM
VSSLAGSLALVTCKEPLRVSMGNQLRTLFTQAGVEAGSTDQVIQVCVAEN
LELGCILIEKAATEKAMRDIDEALAVALGHRKKHREQTGSPFYDMSIFSN
SRFPGALPDMLRPKPGVGGLSPAQLDVYEAFQRALTARGTAAATGVGGNA
AVGGGTNTGAGTLVPPLRPMSSPVMTGAMTVGEKKGLEGELGGAVGVGSV
SLPQALEALDALVLRLNQALQNLVLAAAGRDITFSMLGAEHEVPCAMREL
VHLPQNLPSPAREDVALRASQAVFKMLYNNSASVGGGAASPSGGLSSLTS
GEIVRLEALVTVLEGLQVKKADLLSWIGYVPVSELNRQSHKTALLLLLRS
DLLKTSDMDSYLAKSMDQGRNALWVDIATQIARFIVMERVAAYQELAQTL
DCLQKSAPRQPMNARKEIQRLVDDIRLLVSQDAAEAQQKQLAAAQQQQPP
QLQTSPVLQSQQASQQAAAAAAAAAVMKGGLQAQQQLAGGVSIGARLAGN
LSPAARQDRQDVTILLEHWIVLWNESPGSEKAYLKYFTLLQQYEVTKSPD
QIEKFIRIATDVCVEACLKNAVASEQVAEGVADGGGGVQRTTLSYTIVDA
YAKLLFLLVKYNGDVNSRINILQRILKALVSSLRDQSQAQQGGNQAAPSG
PADFRPYFRLLVDLLHDFNAFDPALDTNNIQVLTAFAIACNNLQPALVPA
FAFAWLELISHRMFMPALLLAKGQKGWILMHRLLMDLFSFLEPFLRKAEL
TDPIRILYKGTLRVLLVLLHDFPEFLCDYHVSFCDVIPPSCIQLRNLILS
AFPRNMRLPDPFTPNLKVDLLPEITQPPRIPAGYTGALLSLKHEVDAYLK
TRAQPAYFLTELPKKLKANTGDGQAYNTPAMNALVIYVGTMAIAQIQNTT
AAGGGAGAVGTGAGAGAGATTSMAITAHSAPMDIFQGLINGLDPEGRYLF
LNAIANQLRYPNSQTHYFSCVLLYLFAEASSDVIKEQITRVLLERLIVHR
PHPWGLLITFIELIKNPRYTFWQHSFTRCAPEIERVFESVARSCMGQPQA
QQQGGAAAGGIGGEEGGPVVVSGP
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Synonyms
Publications