Naga_100080g19, gene3275 (gene) Nannochloropsis gaditana

Overview
NameNaga_100080g19
Unique Namegene3275
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:317244..324250 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100080g19
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:317244..324250 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G01010NO07G01010Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3400rna3400-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3400rna3400Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3400

>rna3400-protein ID=rna3400-protein|Name=rna3400|organism=Nannochloropsis gaditana|type=polypeptide|length=2128bp
MSSAPGEDDAGKDEVYHDLERRYILLQQDHARCKKEGEELQARLTSSTET
SAQDKAKITELQQALAARESAVAEQQRAAEGKEHDVRRLTELLARANKEL
DSNKAFLHVKDEAVTKLEERLRQVTSEKTALETEVLPTRVDVDRLRRELD
GCQVRLRDAEAEVNLRLEELNDERKRASSLRLDLENKLNRAESSVSELQE
RVTGLEGHLRSRNAALKQKEEEVRAQVKQFSEIESRFDAELEAQRRVARL
QEEQRKEAFTARDALLQEVQSLKGAYERQLQQQKERLQAQREKYEKLVEE
LQQEHQERLTLLEEELRAERKARAALEKQAPVGASALPQTAAARALASLT
QDVSLTERLNQLADLETALHKERSEKERFKFFAQQLTKEIGEKAPILAKE
RRERDLIAKSYDKVVAQLGQATQDLVSTQRRLQQVGEERETLIAKQRGHD
QQVEDLSRQVQLLLHERMKARAAEAGTERAIVLASSSSQRQSRAALPAST
NQAASRNLAESLLTFKDVQELQTRNAELLAVVRKLTDEKATHQQEGERAL
VPAAVQHELGNAHKELKRLGEDREAMRAAVATIASERDMYRLLLVKAESR
LLAVGETPPSVQSEQRQPNQLQLPATAEAKSAVAGPSAREVELETKLRDA
MDRLGRLEELYNEQVKVCESLRTDVSVARQDATLSKADATFYQERYKRSQ
EDLDKNREDQQSFMSEVQALRAREHALEKALSEKGHDLEAARDEARRFRI
SLQQATVEKEVAAGAEKRLEQDLVQKRAEVERLTKVLETSQSLSASLTAR
TDAEREHLENDRKSLQAQLVAMRKDLHEERAAAEAKMTAQTNEVRVAKAK
SEEDAKVLSEQRGEILELKVQLNAANEKAASLLRQLEGTQKRLDSLTTSG
TVSAIAVREASEKEMELERLTQEMGEVKAKLAVVEGQRDTFKAASEAHER
QMRELQARWEASETEASESVAKARAEAENLRKRLEEGLETTRAAVQENHG
LREAQNQAAEAAKKEKQDMLEQLEAARKAAEHARGREAELLAEANRASET
AEMAKEQYRRELQLHAEAEAGMTELRKELETVRGSKAEVDDRLAQVNASA
LEKERAYATELEGLGEASRKEKQRADELQEQNKVMHAQLSVLADHLKKLQ
EDRVHALGARDGSVGAGTGGSAESSGEQASGGSSAMAEADKLRRAIIDLQ
GVAHYHRTQKELMEAGKEAAEMEAVRYKSTAQQLQKLLDQSRRELAEERK
TRPTPESEREHAALLVQVQEISTLKDALAHIRQEKDRLEKRLRAAEKEVV
DLQKAAGPAQQKEQQLEAERKALMAERDSLQQEVTAYSERLSSMVTRFHQ
IDPEVHRKLASDLEELQKARIPELERRIKEAEAKGLEQGKRAEEAEKKVT
DLERRAQEGENKAAAALRVTHAAKRQINTLKQESEGLSAEKTRLEGEMAT
LKAEVESARGEGGTSAARVKALEEEAARLRVSDAQMKSEITSLKQQAQQQ
QQQQALAAAKAAAANVPAPSTEPSEQQKEVAKLQAELDAAKGTVQRVKEA
GRSALNMKEVFKTKLKEVQEKYKELATEVNECRAQEGKEPIPEAEIMVVM
SAPKALPLASATSQSAGAATTGGSGTSAGSAAAGGAGRGGGRVSGRKATG
RGPPTGGRGTGGRTTGAAVAGATGGRKAPAIQTKVATSPTQQKQHAQGTD
EAPAAAMTATVTGTGETLAGQKQQQQQIRQSTTGVKRSIGSPATSSEAQK
GKEAGTGGGQGEAAEAAVPKRAKIDPSGTSGQQDQTAASNQQQQQPERQT
TQDKDTPSQFASPMEVNKEVASTRAGIPGSPASRSTVGLNPRAGTFMPGS
TPTKPPGSGSGSSTTMPASSQPSTFSVQPAATTSSSASGAGAADTSTSSK
PSPFASFGTTTTPAFGGAVRPSFGFGGTAPASTTTGAKPDNANASTSSSG
AVPPPFGSGATLGSGFGGAGGGGGGGGRPGGATFGAFGATSTSSTPSMFS
PFSFSTSSSGMAAGKTAPAPGVAANPSGTSPAPASIAAMNPAASSTTPEE
APAAGATAVSGSGAGAAGKPVGQTEHDKMLRRAMRFGPQAPAPLEAKAAE
EGPNAAATEGPEDKGQEGDTGREPGAES
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Synonyms
Publications