EF2, gene325 (gene) Nannochloropsis gaditana

Overview
NameEF2
Unique Namegene325
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:832161..834782 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100003g160
Gene biotypeprotein_coding
GeneEF2
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:832161..834782 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0008135translation factor activity, RNA binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G03250NO02G03250Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna337rna337-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna337rna337Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna337

>rna337-protein ID=rna337-protein|Name=rna337|organism=Nannochloropsis gaditana|type=polypeptide|length=873bp
MVNFTVDQLRAMMDLKHNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAAKN
AGDARFTDTRADEQERCITIKSTGISMFFEYDMDAGEKLAQAAAEAQLTG
EKADAGASSANSSAITTAAAANVEINDKCFLINLIDSPGHVDFSSEVTAA
LRVTDGALVVVDCIEGVCVQTETVLRQAISERVRPVLMVNKVDRALLELQ
LPPEEMYQSFSRAIESVNVIIATYNDALMGDVQVYPEKGTVAFGSGLHQW
GFTLKKFARTYAAKFNTDESSFMQKLWGDWFYDQEAKKWKTQSENGTLKR
AFCQFIMDPICKVFEAVMEDKTAKIEKMLKVIGVTLKGDDKELKGKPLLK
RIMQKWIPAADAILEMIVVHLPSPVAAQKYRVDNLYDGPLDDETANAIRT
CDTGPDAPLCMYVSKMVPTSDKGRFYAFGRVFAGRIATGQKCRILGPNYV
PGKKTDLWVKNIQRTIVMMGRYVEQVQDVPAGNTCGLVGVDQYLLKSGTI
TTAENAHCIKTMKFSVSPVVRVAVEPKNSSDLPKLVEGMKRLAKSDPMVL
CYTEESGEHIIAGAGELHLEICLKDLQEDFMGTEVKISDPVVSYRETVTG
VSSQTCLSKSPNKHNRLYATAEPLADGLPDEIEDGKVNARDDFKLRARYL
ADTHGWDVTEARKIWAFAPDGTGPNIVLDATKGVNYLNEIKESVVGGFQQ
ACGQGPMADEQVRGVCVKLLDVVLHADAIHRGMGQIQPTARRVVHACILT
ASPGVLEPVYLCEISCPQDAMGGCYGVLTRRRGHVFSEEQRPGTPMMTLK
AYLPVMESFGFTADLRAGTGGKAFPQCVFDHWQMMGGDPLEAGTKSNEVM
LGVRKRKGLSPEIPPLDRFLDRL
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Synonyms
Publications