Naga_100584g5, gene3196 (gene) Nannochloropsis gaditana

Overview
NameNaga_100584g5
Unique Namegene3196
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:114484..117598 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100584g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:114484..117598 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0006091generation of precursor metabolites and energy
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G00260NO07G00260Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3320rna3320-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3320rna3320Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3320

>rna3320-protein ID=rna3320-protein|Name=rna3320|organism=Nannochloropsis gaditana|type=polypeptide|length=413bp
MFPSVTCPILRRGRRPVTCLYMTTKRALANKVYESAAEAIQDIKDGSKLC
VGGFGLCGIPENLIAALVQKGTKDLTCVSNNAGVDNFGLGLLLRSKQVKR
MISSYVGENKEFERQYLSGELEVELTPQGSLAERLRAGGAGIPAFYTPTA
YGTLVEKGGFPIKLNPDGSTAIGSQPRETRKFQGRNYVMEEAITGDFSLV
KGWKADTKGNVIFRGTARNFNPDAARAGKVCIVEVEDLLQPGDLHPDEVH
LPGIYVHRIVKGPHHEKRIERLTVTKKGSKESQGGKLNPARERIVKRAAL
EFEDGMYVNLGIGIPVLASNYLPEGVSIELQSENGLLGMGPYPEVLTFPL
ALPSSPSTLVHSFDLSLCLCSTPSRLLPLPPATPLSPSLSPSRPPSLTLA
THLFASLGGDTRS
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Synonyms
Publications