Naga_100138g5, gene3142 (gene) Nannochloropsis gaditana

Overview
NameNaga_100138g5
Unique Namegene3142
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:1153127..1162113 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100138g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:1153127..1162113 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03850NO09G03850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3263rna3263-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3263rna3263Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3263

>rna3263-protein ID=rna3263-protein|Name=rna3263|organism=Nannochloropsis gaditana|type=polypeptide|length=1509bp
MTFSASWFCPGPPLEEGGGENWCLYNTFKMLVTTPSVVASAVVGTWIWRK
RRRLNKEDPRRTRTLADFFDKLVIILFIIDFIGSLIEYIYVFDTNAFPLK
YWDPERRGPVNTILYVELLEAQCMFNAFAHCYISYIMYSFIGRRRSLSRL
KRDAPPKKMLAIACLGVVLYGVFWTVLWKYAVAHDSFRHIFIAGFAVDLL
AFPPAIVFMLIMYWLTWRALKGRATSDDPNSFLSGRYARIRRKLMLVAIV
IPSALSIGSAMDFIHWSLWMQQEGHGQTSIIVTFIRLAAFRSIGLLDALI
FGGAFDVCLDGNLKKSMSKVGSGLFSRARRLDRRSTSQLGGERMHEEEED
TGEDIERPGVIGGAQGGASGKIAQSRRAKKRVPPPPKDQAMSPLIRTPSR
SVHSPLPPSLDSLSQSPDISQDGALSPPPPPVPVPSPSFARGKVFISTCN
VGGCSDVRSFGSIPAWVPRGYDLYILGFQEVLILDSLRIALHDHLGGPAV
YEMFCREIGDATILNGMIAITIFARTVDIQRGAVVVARSASGTVNTGMSL
GIMGRAANKGTVGLSVRYHDLSIACITAHFAADKHGHSRVTRRNQDAVQT
LRELSLTYDNEDFDAHLQHDVAILLGDLNYRLTAKPLDILRRVSESAAVE
AAWWQNQTASPTGRDRERPRAVALDKGGNERQGIGTGRDRTWRDCRYRSL
MFGEAEEESEWQEGGKEEMERAGSDRDGVEAPTSPARDVADSKQEAFLEP
SSPKPGKEESHCQHEQSQPVDVLGCTRNHSSVHSTRQPNYLLPVDIPPAS
LPHHVTSLPSETHAADAEEQEAPSSPAGPDLTPSAYPSDSPSSMLPAPSR
LANKRQRHISFTAAEALYLSREASEGEGREGRSKGGRKGGRKERQLMDAW
SWIGKCDELSRAMETGDLLFGFHEAPIRFPPSFRWVSGASAGDFTQLSLL
EKCFTLKAFSKKSGWTPRPPSYTDRILFHALPDVGPRVFIQGYDMCDAIT
GSDHRPVVCRVDLKLNTDIIGFNTVPQVSPHLPSLSHCSSSSSSLPSMPL
SSSSASHEISPGRGKPPRVFSRLRHETTGDEEVERRKPRNHESKPVPPQH
QGPQGFSPLPASALQGRDPPAPGREVGKEGRQDAAAMEAAEPVGGGEGGG
HERGKRRDRACEISLLPRGEEAISANGPARPAPLGASSTSYSSSFLSTVA
SRFHSAYLKRARPPSSSPLYHAVLAGPRASPLLQASNSHIRPVFKPYTGA
LAIWTVELTHLLLVGDSDDNDIDVPEYDEMTVLFPVSAEDPFAWDRKSIA
LDESFLDMPRMARRAGSGHSASSAGGESSPIRQKDGESQEETITHLVHSV
HRISHRSLQLAHEQSPTSQGLSMTVRAIVAPAFTRHLLIKLTDYKGRDIG
QGGHLPPSRPPSLPPSLFLFGPGGAPVRPSLLGGTAADGLVVTTLPGDRE
AVPRPHAGGWVWEDGPTPRGGTRGGSAGVRKGGKGVNGGKGKGMESMLYI
HVLIYIYQV
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Synonyms
Publications