Naga_100015g36, gene3001 (gene) Nannochloropsis gaditana

Overview
NameNaga_100015g36
Unique Namegene3001
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:774423..779239 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100015g36
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:774423..779239 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL129ngnoL129Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G02860NO09G02860Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3123rna3123-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3123rna3123Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3123

>rna3123-protein ID=rna3123-protein|Name=rna3123|organism=Nannochloropsis gaditana|type=polypeptide|length=1431bp
MQATILFLASSHHLRAPELYASISRGEAACLSPILESMESPATCPTSAIN
ASSIFMAAACNSFSQCLDWAQGTPEPCEALKEKLVVAYGAHDWVAITTAD
GAVRHCLRGHKAKVHCVAWLIPSRFLVSGAADGQVRVWSINEDGSSWTCS
QVLYPDTEEGEACVNRLAVLDGELIAAATTLSVTLWHCSIKSGPGGRWTQ
VFSTAMPPAQIPCAVALAPLVRRRGDAPHAELALLIGGVDGKIHVWNGTG
LRRGQEGCEEEGQESAGSWSWRSAGALTGHQAWVRCLAWRSLREEGEGEG
EGVMVASGSQDGKIRLWRVGAMEGAEGIRPGRGEEEAEEAGEGEGRLRVE
EEEDDHEVRLVMEGAGCRYGIRLDALLVGHEDWITGLAWRPHGYPDVGKK
RQSLALLSCSMDRSLIIWRPEGARGAWTPRVRLGDLGADLGGAVGGNLLG
FLGCVFSETGDRVLAHGFGGSFHAYECDRRAEGGGGAEEEEEGEERESRW
VPMPFATGHFEEVSDVQWERPGGGVGGGRYLVSVSKDQTTRLWAVASQTR
RLHEMSRVQVHGYDLSCCDMLPPRRQGPGDEEVWQEHRLVSGADEKTLRV
FDAPRKVLGLLAALAGIQSAQPARIETAYIPALALSSKAVGVTASSSSTV
AHVQGVEAGAGREEAWKAGSAVGGGGLGKEDAEAEAKARARVSWEGRGAN
PSLLEGELVDHTLWPEVAKLYGHGDGIMCLAADPTGQIVASACKARDAET
AQVRLWDTGSWRGVGVLPGHASTVVQLAFSHDGSLLASVSKDRQVCLYAR
EEDGEGPRAGAFRPVQTLARAHKRIIWSCDWAHDDALLATASRDGVVKIW
GRQGEGGVMWRDQVLPVLGPEALASFKPSTSETDAVTAVAFAPRLVQGAD
VAGYLLALGTESGNVELWTGTKDKGKSWRCLLAFDGSLPHAGAVRRLRWK
PLSSAQDGDEKTSLILASCGTDHAVKIARIRHLVHLNHPPPRQCYEDTLN
IQILLPLPRTDAASMRRLCFSYPSASIIIVALALVPSSLSSQRIPSFCLR
EASHQGILRRRCTPVLRTRMRLSVTTPSMAAQPHSTTTRPAFPAATALHR
ASGTILLLATTEDKASVNMLQALLARGGWEETTPVDASSRVWHRPDGPQN
VFMWQITQGFLRADWLDKAWLTAHPSQRIQEMIFLSRHAAASGRPSLTIH
PIGNPGQPFAPQEGARGAHGGIPGRCVPPSPRMAPLFRQLHRAVQDAGLA
GTFEVTLEATHHGPWHMHPTMFVEIGSKEEDWGREDAAHVWADVLDKNLG
LSATEANGVRIPAVEESKLVIVGAGGGHYTPKMNDLLRHREDVLLGHILA
SYCFTGSEEDWKRGIDEAIEATRRAYSLPSENAEEEDGGKEETRVCVYID
KKAFKSAPRQALVQYLESRGIQCAFKENDLN
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Synonyms
Publications