Naga_100248g2, gene2802 (gene) Nannochloropsis gaditana

Overview
NameNaga_100248g2
Unique Namegene2802
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:273708..278603 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100248g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:273708..278603 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL125ngnoL125Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G00340NO09G00340Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2921rna2921-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2921rna2921Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2921

>rna2921-protein ID=rna2921-protein|Name=rna2921|organism=Nannochloropsis gaditana|type=polypeptide|length=1211bp
MSESHAGLDGRPGACYGHRAPSFVPTGFLESLAETQSTSRFNLLLLEHGE
VYFGDYAVVRFRPKGRSTIKVPGRLKVSSRSLVFDPVNDVSQPLLRFPFK
HMTRVPRHAPHGMEAAEWSTLTFSSPSSSFSSSSSSPPPSSSLDGLFVFS
CACVTEMKANDLVGPYLQRQSGDPDAEGPDFIFRLQHTPLADFLALVGRL
CEVAARLVKGDGPGLGAEEALLRPILEERERASGIFDPVQLVDFREKFIL
SAAVPVDRISPLIKNPGVVMLTDRRFYFQPAELNNVGISTTSLALASIVQ
VFKRRYMLRQTGLEIFFAAAGEGGTEGGMEDGKGGVGWASGSGRGSGRRQ
GGGLDSRDGEGLGTTATRSKGGQGGEVTEAPPRVNSVLFSFRSSQERDRV
HALLLAQPALTDGVLQPVRVAEVTRRWQERRISNLDYLLYLNTLADRSFK
DLTQYPVFPWVLADYTSKKLDWESPSTYRDLSKPMGALHQERLAYLRERY
HSMPEENAEMGIPPPFLYGTHYSTPGYVLFYLVRAAPEHMLCLQDGKFDS
ADRMFSCVADTWQSCLTNPADLKELIPEFYFSQGDFLVNVEGLPLGTTQG
GVRLGDVALPPWARNERDFVRKMRRALNDSTYVSQHLHEWIDLIFGVKQK
GEAAVSADNLFYYLTYEGAVDLEQVTDPLERAAFEAQIREFGQTPKQVFL
GPHPRRDDPPSVPVFLTPSFQDSSSSPAVGLPSNGGGGARPRGASEHELE
GPWEMVRGESLLLSQSLSQSLSQSMGGSGWEILRQDASEREGGREGGVGP
EASSQSSPVHLNGRGSILSPKTLMAKGLGLLPPPAGTDKCTSVQQPEQLM
FVMDGAESLQSPTSLRLNEQAQRTLEEMIRVAHNEETYANGCSGPTAAAS
LRGGASNTNGDGVVAGVRGGVDDLPAVVRLEELISREALLSIPGSTPRLL
LPLPRAGIHKAEGGSQGAATASTGPEDARDAPRLGLLGSRAVCLHHDAVT
SLKWADGGRSLCSTSDDGSFRVSTLLMGPQDEGKRDEKASFQSKRHFSPS
DIALSSCALMGGEASEGGLEVKGEGGPAASPHTLAALGSYDNHVYLYSIP
SARQLLRLDAHDDAVSCLDVAGPYLASGSWDATVKVWGIQSSRSCGSLIE
PMPLAEFFEHTTQVHCVALKVEASGTEAALVAAGAEDGQVMVWNLAARCL
VSSFRVGGGRR
back to top
Synonyms
Publications