Naga_100074g2, gene2718 (gene) Nannochloropsis gaditana

Overview
NameNaga_100074g2
Unique Namegene2718
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:23319..33626 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100074g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:23319..33626 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005215transporter activity
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL126ngnoL126Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G01880NO23G01880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2839rna2839-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna2838rna2838-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2839rna2839Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna2838rna2838Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2839

>rna2839-protein ID=rna2839-protein|Name=rna2839|organism=Nannochloropsis gaditana|type=polypeptide|length=1247bp
MEDMPPFLPDDSSALVSRRFAPLVEKEGVVEGGVQCRPPWPPLPRSLPLP
PYTSSALDEMGKDSLHTPLLPSSPSRHPALPPFSPSSKRKRWKGFSVTLL
LFQLARGKVVVQAVWQLLGSLAVFIAPLALRKIVAYVSQDRPEESQVIPI
PILVATALLFLGPALQAVSDGQNFFMGRRLIVRYRAALVDLIFRKALRLN
LSASSYSVGELTNLCSVDANSVEAVGYIHFLWSTILQIVVSVALLFNVLG
ASAFAGLGFMVISLPITAWASQRIQVYQTRMMGKKDARMSVMNEILQGMR
ILKMCAWEDEFFRRVTRAREDEVRELRCFVYTRAVIIVTWDATPTLVALF
TFIFHTLVLGRPLTSSDGFSALSLFDLLRFPLVVLPDFINYCNKALVSFD
RIETFLTRPEVAPPPSPLPASPSSSAVSSALPRGAIAIDHASFKWGSPQS
MKEHEKREDRVPTAPTLQDVTLSVPPGNLLCVYGPTGGGKTSLLLSLLGE
IPRLSGRASLQGQVAYVAQKAWIRNATVKENILFGLPFHATDYERAIDAC
ALCRDIEGWPAGDATEIGERGVNLSGGQQQRVNLARAAYAALQGTADIIL
LDDVLSAVDANVGEHILHQCLAGPKAVMAGRTRVLVTHQVLSTLPFADYI
VILTKDGRVAAQGKREEVCKEGGKEGGRELLARYGVVDEKEDRREEDDED
DEGWREGESEMGKEELGKEGFSVDQNGSGRGALVSNPGKASQIWAEGSGE
EGGDVQVKATVERGESQKPKEGANKERLAVAKGQGEGVQEGKESGTEGVL
VLEEEREEGALKWTTYLAYFSAMGGLLPGFFLFALYLGVELLRFLQNRSL
GQWVDRLAASASSPSTLQYALPFLLISLGNTTLILLRISLQAWASLRASL
KIHAAMAARVLRAPLYWFDRTPMGRVLNRFSSDVETIDKNLMDSLASFVE
CSLNAVAVVAVIAYQLPVLLLGLTPLLLVAGVVARMYLRSSRAMKRLESN
SRSPIYSHFAETVSGVTTIRAYGAQDRFVDENHDKVDAYGRVNFFLWTSN
RWLAVRLQLLGATVTGMVGIYILASLSTSSSSPSSTSVSGAEAGLVLLYA
MQFSSALNWLIRDQAEMEMNMNAVERTDAYCHLEQEAPTVLPGSGTPPPS
WPSQGEISVRCLTLAYPSAPTAPVLRSLSFHIPPGTRVGVVGRTGAGKSS
LLAAFYRLVEPAEGSEVVIDGVNTRHLGLKDLRGRLAIVPQEVRLKP
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protein sequence of rna2838

>rna2838-protein ID=rna2838-protein|Name=rna2838|organism=Nannochloropsis gaditana|type=polypeptide|length=1433bp
MEDMPPFLPDDSSALVSRRFAPLVEKEGVVEGGVQCRPPWPPLPRSLPLP
PYTSSALDEMGKDSLHTPLLPSSPSRHPALPPFSPSSKRKRWKGFSVTLL
LFQLARGKVVVQAVWQLLGSLAVFIAPLALRKIVAYVSQDRPEESQVIPI
PILVATALLFLGPALQAVSDGQNFFMGRRLIVRYRAALVDLIFRKALRLN
LSASSYSVGELTNLCSVDANSVEAVGYIHFLWSTILQIVVSVALLFNVLG
ASAFAGLGFMVISLPITAWASQRIQVYQTRMMGKKDARMSVMNEILQGMR
ILKMCAWEDEFFRRVTRAREDEVRELRCFVYTRAVIIVTWDATPTLVALF
TFIFHTLVLGRPLTSSDGFSALSLFDLLRFPLVVLPDFINYCNKALVSFD
RIETFLTRPEVAPPPSPLPASPSSSAVSSALPRGAIAIDHASFKWGSPQS
MKEHEKREDRVPTAPTLQDVTLSVPPGNLLCVYGPTGGGKTSLLLSLLGE
IPRLSGRASLQGQVAYVAQKAWIRNATVKENILFGLPFHATDYERAIDAC
ALCRDIEGWPAGDATEIGERGVNLSGGQQQRVNLARAAYAALQGTADIIL
LDDVLSAVDANVGEHILHQCLAGPKAVMAGRTRVLVTHQVSSTLPFADYI
VILTKDGRVAAQGKREEVCKEGGKEGGRELLARYGVVDEKEDRREEDDED
DEGWREGESEMGKEELGKEGFSVDQNGSGRGALVSNPGKASQIWAEGSGE
EGGDVQVKATVERGESQKPKEGANKERLAVAKGQGEGVQEGKESGTEGVL
VLEEEREEGALKWTTYLAYFSAMGGLLPGFFLFALYLGVELLRFLQNRSL
GQWVDRLAASASSPSTLQYALPFLLISLGNTTLILLRISLQAWASLRASL
KIHAAMAARVLRAPLYWFDRTPMGRVLNRFSSDVETIDKNLMDSLASFVE
CSLNAVAVVAVIAYQLPVLLLGLTPLLLVAGVVARMYLRSSRAMKRLESN
SRSPIYSHFAETVSGVTTIRAYGAQDRFVDENHDKVDAYGRVNFFLWTSN
RWLAVRLQLLGATVTGMVGIYILASLSTSSSSPSSTSVSGAEAGLVLLYA
MQFSSALNWLIRDQAEMEMNMNAVERTDAYCHLEQEAPTVLPGSGTPPPS
WPSQGEISVRCLTLAYPSAPTAPVLRSLSFHIPPGTRVGVVGRTGAGKSS
LLAAFYRLVEPAEGSEVVIDGVNTRHLGLKDLRGRLAIVPQEPTLFRGTI
RSNLDPFNEYTDAAMCDALRRAHFWEALERKSGQDKVKGAESGVLAMPVT
ENGENLSVGERQLMCLARALLRKRGVLFLDEASANVDAVTDNLLQETLLD
QCKGCTVVCVAHRLATIVTYDRVLVLDAGICAEYDSPAALLAKGPSGLFY
NMCAKTGELSNLMAMARGEKNGRGSLGTMSDHC
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Synonyms
Publications