Naga_100282g4, gene2696 (gene) Nannochloropsis gaditana

Overview
NameNaga_100282g4
Unique Namegene2696
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1310732..1316394 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100282g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1310732..1316394 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G05330NO05G05330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2816rna2816-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2816rna2816Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2816

>rna2816-protein ID=rna2816-protein|Name=rna2816|organism=Nannochloropsis gaditana|type=polypeptide|length=1078bp
MLGALSKPAPSVDVAVEVPAPTFGPRWPWLNYRYHNRRNAYLAHIKQELE
GVEAIRSIEVEAFKGDHRRPLLVLTPTAHTGGVKVRLWPSIALVDDVKGG
VNSKKKGAGKKGESEDATKGGGIMERPKLNPHRCNVRRQSWKDGPEPSTP
HYSQGILQEGSFKQHLAVLHSWLGRECTGVKQAVVLLKVWLAQRGSLSAL
DSFDGFSLLCLAAFLLQERRLNPRMEVLPALMVMLQFLAETDLTETGTKP
LLLKGASSPLDPSLFVGAFVACLLIEETGGNAFTYLSRSACAELQEEANR
ALKLLRTDVRSASTVLFLTPFPFLRTFDYYLRLPLRSKSEQATDAVSVAT
AQEEERVCCDLPVASYLSRKAAQILSLALGNRARRVRALPAACCVEQNLG
RKGERGWVWVGISIDPMQALRLVDRGPPAEEETKAREFRAFWGQKAELRR
FKDGAIVEAVVWGGEGAVTAYTGGDRHKIVEEIMRYTLGYHLRHRFPPSV
ATSLRILGNELVMLLELSKERSANGASASSSLPSPSLTPEAMTKAALTAL
DSLTTKLKEGVSSCLPLAIEAVAPLSPALRHTSLFPPFPHPLVHGASRLL
KRLEGQQVSRTVAPLPIQVQLQKSNKWPDDLEALRRAQTAFLLQIARSLE
RDPEVKASLAGPNALDMMLDGYVFRASLSVFQESSLLGLEGERVEKEEVG
RWTERAPTHHRLIQACHAANPLYGRVVRLCSIWLSNHLLPPIPSDSALLS
SGTASSSPCLPLEALELLVAALFSPPGRPPGSLLAGLLAFLSLLSTHDWH
STPLLVDPHHTLLPSDHEAAEKAFEKHQGKAGVREGGGSMMYLLAPYDKE
RGWRPSWTSSSCPEPVILARMKALAAISLQSLLTWMEEGGKEGGWRAAVV
PSSPFQAASSPLLQPPQFDVLIRFKPAWVGPLFSGPYREGWRAWEEVQKG
CKALRCGHLYKNLAGAQAQKRVVGMDPVSEYQKKLVKRYGGLALFFMAGA
EGGHREGLAVRFRPRLFLSSSFSVLQSRGKIPIKVKPDEEKRENIDGEGV
PFMLPNVGEVLSDFKRLGEEIVEEVLVL
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Synonyms
Publications