CPS, gene2552 (gene) Nannochloropsis gaditana

Overview
NameCPS
Unique Namegene2552
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:919506..924116 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100008g37
Gene biotypeprotein_coding
GeneCPS
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:919506..924116 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL120ngnoL120Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03910NO05G03910Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2669rna2669-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2669rna2669Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2669

>rna2669-protein ID=rna2669-protein|Name=rna2669|organism=Nannochloropsis gaditana|type=polypeptide|length=1536bp
MYRALRSPLGSRAAEVLQLHHVGASKRLVPAGFSSSFKNQGIKSVLLRRL
LATQSDGAASPPTKRAWLVLEDGTRLQGYSFGADKPMNGEVVFSTGMVGY
TESLTDPSYRRQILTLTSPMVGNYGVPDPKVLDELGLPKAFESYKIHAAG
LVVQDYSHHYSHWNAHFSLGDWLKQEGIPAICGIDTRMLTKKIRSHGAML
GRIEFEDGPKPELEDVNKKHLVAEVSAPEAKVYGKGNPIKILAVDCGIKY
NIIRHLVRKGAEVKVVPWAHDLVSEMAHHQGLFLSNGPGDPSMCTTTVQH
LKELVNDPNFTKPVFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVVNML
TGKAFITPQNHGYAIDDTTLPTPWKPLFRNLNDHSNEGILHTQKPIFSAQ
FHPEAAGGPTDTEFFFDVFLDTVREQRKTIVFPPVKPTPARPEVAKVLLL
GSGGLSIGQAGEFDYSGAQAIKALKEEGLEVVLMNPNIASVQTNVDAKSD
AKADQVYFLPVNPDYVEQVIKRERPDGLVLSMGGQTALNCGLALHHKGIL
AKYNVKVLGTQIDAIEASEDRQLFSDKLNEINEKIAPSITASTIAQALTA
AEKIGYPCMIRSAFALGGLGSGICRNPEHLEEMAAKALSLSSQILVEKSL
KGWKEVEYEVVRDSADNCITVCNMENFDPLGVHTGDSIVVAPSQTLSNEE
YHMLRETALKVVRHLGIVGECNIQYALDPYSLDYCIIEVNARLSRSSALA
SKATGYPLAFVAAKLSLGITLPEIQNSVTKSTQACFEPSLDYIVTKIPRW
DLNKFQGVATEIGSSMKSVGEVMAIGRTWEECIQKAMRMVDPAIEGFQVR
KRYDDDSALLYELTNPSDKRLYAIAQVFAEKTKTVEEIHELTAIDHWFLR
RLERISKQRDVLLKHGNGKGALDSLSAEELAMSKKLGYSDRQLGALLGTT
DDAVRAKREAAGIVPSVKQIDTLAAEYPAKTNYLYCTYNGSEDDVVTGEG
GVIVLGSGTYRIGSSVEFDWCGVSAIRALRGMGYRTTMVNYNPETVSTDY
DECDQLYFDELSKERIVDIYQREGAQGVVVSVGGQIPNNLAMPLHKVGVK
IMGTTPEMIDQAEDRFKFSALMDSLGIQQPAWKELADTKSALAFAKQVGY
PVLVRPSYVLSGAAMSVAFNDEALLRVLSVAADVSQEHPVVITKFVNGAN
EIEMDAVAQDGVVMAAAMHEHVENAGVHSGDATLMLPPQRISAYTAMRVN
EATRKIAKALNITGPFNMQFLSKGKDVSVIECNLRASRSVPFVSKTMGVD
FIEAAARCMVGEDVTGMNLPQLGQTGRPKGYVGVKAPMFSFTRLRGADPV
LGVEMASTGEVACFGANIHEAFLKALISTGFKVPEKNILFSVQDSLRDDV
IHAAFQLHTLGYNLYATRATHDFLLSCHVPCHLLHYPNQPEKHPNVLEHL
KNGKIDLVINLPTPESKQVENNYLMRRTAVDFGVPLLTNIHLTKLFAEAM
TKYKKGELIGIESQNLFDYYNAEAPEEAWTSPSEFH
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Synonyms
Publications