Naga_100026g51, gene254 (gene) Nannochloropsis gaditana

Overview
NameNaga_100026g51
Unique Namegene254
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:667927..681083 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100026g51
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:667927..681083 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL002ngnoL002Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G02520NO02G02520Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna265rna265-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna265rna265Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna265

>rna265-protein ID=rna265-protein|Name=rna265|organism=Nannochloropsis gaditana|type=polypeptide|length=4277bp
MSISISIGGLLLTLFRVGSLVGIIIFCWYWREKSKKKKWLYLDVSLWPEI
SLGLWNTKWSTSSLLLRTINGAMRQGPLPLQIEAITLHVICVSLPWREAF
KIRNWRVHLQGISAVGRMTHVEEWDEADMLRKAVAFKRQEADLSSFLVEN
YCLQRPGVSSRPVPTPISQKLRWLDHLLSGLRLDLDNVHLRVNDSRSVSC
MGLRVLRLSCRPMHGIDSDSGALRRCVEVEQAVLYVDPILAAGHASATIP
GLGSQALSFQNLEEEGKEPPHAEVCAIRSVVTQVAIPDLGSVLWASGLTP
GGKKRRVTISGVVAGLKGHLQPAQVHHFVFHLLHVFYGGAYRAWRAALIQ
KHREEGCRRLREEERDYYMFLDRQLQMHQTKNTALQYTSEHALPDRKHPV
SSHPRAGERRELRQNLAALEEVMHYAEIVHLRCQAREWNKHGLMTTARRI
VDGWELSEVAARSSSSVEEELRIDEFEPVVAEFSALALCLAHARAQYTHE
NKSIREILLENVRIEDIEIEWHGVRRANGHLAAPLNFDGPLEVTVHAASL
SGHCRILLATGPEGLAVGEDGLQEEPDHGWFAMAADLQRFCFVNAAERAL
NHVTPFLLCGPHDRPHDAVYLNPTATTTPPQVRWSLRLWSSGRRHESLHF
EECRLAGYTPRIFAIVQAVIDPFRIPDVQLWTTDTDFAAFWDWEAKRLAE
DRLTRRGLPGFKGENILLSTLPSTPVENRAVPATHEDVKAASVVAAVPQL
LEGWFLHYSLSLKTCEVLLIANPEDRESAMLAAQVSLTALISCKPGMGES
FDVEVQSLSAMPALTDKDNRWLPLEALPGCVPLAVHEGLNGAGLWRAHRN
VLEQLSASLYYSLEPRRIFNSSTGMAPAALSGSGQDTQEEGGLMCQVSPT
RRRRAITEGSRSPWDAEIRIPRCVSLNAKRVHFWVEDGMRAKAGEELRGT
PIVIEKFCGLSNLGLVVRCGNETHVVKNFSGEVGSNYRKPRATNTGLRSQ
FHASSTKASPTFTWNAAFELAHEFVTADMSAKGDVEVLFEVVNLGSTKLE
EEEEGWPILATGTLLLDVPLDEDDDGEDENAAKAQGVVAGYKVMRDVSLI
GLGAWEGLEGHLQAHVRMGLRLLSVTMHEIRHLLTLAEEVGRDARPFLQV
SLGDFHSQTEQLSGLPDEIIEHEMVFAAEGKNVVLCLELKTFEGRVHERI
RAQAMLAVGREGNHRGLLPLKDTKGTVLCEVRVSVDWIDSFRGGSSIFDH
GERVGTKQSPRFVQALQVLRRQLFVIEPEAAVTQKISLHFSALEIHGTDV
DWAVLLAMLQSFRNLSIVRSAPSVDDTAENSALTRRLSRTSSTNQLREGI
EGDARERWWKRTIYGIFKEVDQDNDGRLTRSELVRLLHQVAAHLCLTRSE
ACEQIEHLLHNMDWDRQVEKGTRASDQAISWPGLREALIGSVHIYSSEHA
GWLFDRARCCEYASTCVALKVFPGLPSSYLSFTCYTGSSTAGTTSARHPL
GAYLASLEGDPADPLALFWELVERELGERRGNVGSKTRAEPGQSPSQAFA
ALQGMLVRALQNYKIAKDAWGLIIVPAIHKLPLLRGVERDGYEVMSAPVS
VGDSVYSDIKVELVALPYMLASQILTGLRTPHKDRKLRGSRVVSFHVSQA
ATLYLCYDRAIPKIPAWLMEAGFRDSNLFVRTTMATHRVLMLTTSTPCRI
VLGGNEGYAAQKGWYKRGLEFFNYFILIGTEKGASETTPASLLPGRWLLQ
EHSPAFFGGQPLHDHLFAALGVGGARLTPLRSAIARDSTRKYITKTAEAD
IRSELKPKLHMEHNIHFSCPRVYLGLLDSRKSRDLTSKLAIRAEAITVNV
SFERPLLEEADWLRLGRTDRLEGDLGLSSLDASYFNPALTAPELVIEPWG
CRCLMRNRLRSAVTTVRIEAPRYFNLNISPSLADVIRDVWRPLRFDLRRY
RSSFDKNSDVAHKAARVVLINRLGVPLSLSPSSHGCRVLILPQPGTTGSN
EHLRYVKADDSNSPPLNERTVVLEEGGRVELELDQIWNNDELYVLPGVMR
RGKHCIELEPLGWQRVSHVGIGLAGAQAYHLTPVDHHRTHRRTQSARTRP
VHPNEQWPMWTAESNSTAQRGNIGSHALQHHQLHNSSSSHKSPRGDVSLS
RKILMVVDAKEPHGDVPDHGSHAALHVEVRTNVRLKNMTGVVVDTKLGRG
GDGVRAFLSPRGAMVMPLSIVRQQPMLSLRRLAQDDMEAVSGSPGSGLED
SGVLLHPALFDARTHEALRRTRGLEERSLALHHRVIGTVAANVATQHCEV
DAGNPKDPVKQKEGEDTNLEGQHASPKNFQSPSTPDAVKARSSQTIRSQM
AIDWIIAILPPYQLSNTLPCLVHIEAFQPEHTPLRGRRFQMQDIKERKHN
NRSLSFGSPSSMRQGPVDPASDIFSLPLDLLPLVSSTSDARVGGDSDDSR
SNFEYASNRPFTSFGEPGQKLYLDKVKAESTGVHESGEKTPVGESHENMV
MVWSGCIESGHHTNLELVKLDRSLYVRVRLMGEAQPGPWSLPVHIPPWAH
LNRTAFNADRESGLNEGLELSWMESGNGSEYHGDARFVRRWRLKGARRLA
LCADYWIINKTGLALSYRPTPLQERGGRTGSPLFEGATTGEAHAMESAQR
HSPLPFEATTAPPTLGATAQGANCRFISDGIHRRCFGRTTRLPLLISCPA
KTLRTMPYALSCEAVNAPLFISELRIETYGKDQVLPATVIRCFETGFPLF
TNSDIRVTELPAPVQERLRRPDGVLCILRERLVAKQSNSDQQDLQDGNEM
VTFVVSEDSYVYAFCCCNRPGDDCEEERGKGRLYPAWLTYEGFRIPPNSG
VLLTSNQHRCYVPHRRFYSKGSTVRLGKIARHASAAHYTVHSTLAADVRS
IDLSRSETSTSSTAKTMHCEQPSLLSKQEHDAARLCRSETDNNESYPAAA
AVKPRGKSPRAKLDELSGAQMVFMICRVDDEEGTKELDVRQIKVERSMRD
RMLCNRQYALTPHFSRGDQLYVDRKASDYALESLPPALAPVPLVAIQTAQ
GDRRGGNSFVMSFSVSRHCTVMLAYDDRASSLPGWLSQLSFESTNWKISG
SKPGAVFTIFRRDLSAHTTLRLGGNNAHGARGCKAMYLVMLVPSPAPLEN
ILPNAPSDLSVRSSDSKGWLDDELKDLIDKSDARLNVDDERLDAKDNDLS
LYWNGQMNGTLRIMAPLFDTLGRDWSSPFNVDAISTTGQVETPSAVLGVS
VKPLPGIFHRTRAVTLWPRFIVINRLRKSVDVLPLLRSRYLDNQSGGESG
GRVMRNTVAAMLNRPSSVLEKGTLVDAESNSKKTTIKGSKPLPRTGVQAT
PDSGALKGQLTPTDCYGVLHAGECMAIYGFLPLRFLPSNLLLPAALKKSH
AAALQHHSTYQMRDDDKDETAMAHALCFRLHNADTSDESQQYSFSHPVLS
EDVGETCVWFWRDSRGVYPGPLVSANVTVHASTVFMTLRDSTLSPPYRIE
NRSSWAYLRCKQSGTSDDTFAVGPMAYKSFSWQERDQLHRLNVSVEDIPN
KDGGGPASSVATAEYSLDEVGPKETMLIASRAFYSGSGVGGFGVGGVSGS
SLARSLTIKARPPQQKLYVHVSTAGRTRVITFSDLPRDDFRNRLNEMALL
SWTWSLFQELYNSLDIHVGLAGFTLNLLDMDGSGRRVVELLSLTLDRLEI
RKEGGKDRAQLALYHIQLDDMRPGATFAVIIQPADSGWHTPARRSKKLKA
AAMAMSVSSTGTCTEQQTERPAAAKEDEHVFSNLVPLVRVTAEPELHTPW
SEVVHFRGLELSVQELEMRVDLDTLFSLVAYIGRLSRFDSEREERAATAG
DIYHHYYNQHRDPSMRSLRTNIMDEKSISLVRRLLRSKVRVPDAALSEAV
GQRLVYIELFHHSSLIVGMELVPGGGNFPSRKERAKQTGLPGNRMDGSLG
LDQELDEALVSGLELIGTGVVQLLADMARSLAQLSGLTLVFNELLFTHYF
GSHYDLGHIVVLSLRQQAITQSYKLLGAMDLLGNPLNLFLGFGSGVVEFF
RRTQAELVGDADSKGEGLRRLAKAVIGGPFSSVSKITGTVASLLEEVVGV
REMAAMAEEGMRDELSSSTARAIGHQTEDGGSSADGWRGRAPPPQHLGEG
ILKGGEVFYKSVKSGVKNIYDLPQQGASREGFSGFLKGMGKGVVGALAAP
LIGTLGGISRVTDTTAYFEKPRILRRRRAVRVALESQALPLLEIVQVVQE
EGEEKQEECDEKSKFEEPALRRGQKQF
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Synonyms
Publications