Naga_100044g29, gene2496 (gene) Nannochloropsis gaditana

Overview
NameNaga_100044g29
Unique Namegene2496
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:783385..787456 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100044g29
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:783385..787456 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03320NO05G03320Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2610rna2610-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2610rna2610Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2610

>rna2610-protein ID=rna2610-protein|Name=rna2610|organism=Nannochloropsis gaditana|type=polypeptide|length=1263bp
MTRLRLKVYTAVTTIPSNEVDLELKDDASRAPFAMLQTLIQAHTGLQPRD
QHLMYGKPSFPIQDDMDVQALVRRIAHAEFYTHETSPHHFVSVYPAKILM
TAVQDACSRVYFGDNAVLQPCYMFPDSDHPVCESCQANCFPEGFLQTQNS
PLLRPFVCAAASLCAEGLGNYIFADRLKKAGSLCCRKIEENPALRGSESP
HSMIAEGGSLVLSPPALALLDKFRQAAHSQQASQFERQSREGMDMMGRLQ
SGCTTFSEYESAALKNKALATIPLAMLHANALAAGGDPFRRPLQFHDILL
RELLAWFKRDFFVWVNNPPCDGCGSTDTKIVGGVAPTVSEAAGKASRVEV
YGCKTCPKQTRFPRFNDPGVLLETRRGRCGEWANCFTLCCVAMGFESRYV
MDWTDHVWTEVWSPAQERFIHLDSCENAADTPLMYEGGWGKKLSYVIAFG
RNHCVDVSRRYTRNFENEMLSRRQSVPEQILIQQIASLNQQLCRNGLSVP
VRQSQERMRQEQFELHSLTVLKDAGGGMNIKASERQGRISGDAAWKRARG
EDGADLPSAGQQDRRLASVTSVSQASIGKVEGSDKLSNKMETIEREEMAG
MPIWPSVPGQRSWFISATSVSSVTKESVARLGAKAGFGPEAITVNGMPVA
VGIRGLNVVVLNLSCHIVEQSVAFKASGASGEETESVDDENPALLFLKEH
AVEEKLVLCVMLGQGSRACWDAAAYMLEIARGGASERPEHSQPCIVFAGI
KAVTEYGRPRQHFAQVFVTIPLSNQSFPTRFRKNAASRWDGAIATTPVMH
QLGPLGDGILSDSPLNIYNTLCSTFPKAPLKGFAYKPGYGLVGMAQASGL
RRGDGWITEMAWPSRPSAEDDIKLRVRRLFDLLVSEGMEPNVAAAKALHD
ITPQGPKHREEENSLRGDQLQAPPDTGGMILRYISLSENRLRSCRGTIEA
FDDFEVATPIQAMVERQQGAPILRLQRLRVWSSSNGITGLQAGYGHLKSG
SPFLLWAPVHHCLAGSAASTTFSPDAATTEIVLGTEEGFTEIKISKSDEC
IVGLCFKTTACRELSVGVTESAGSRTSDISVPPGWQVTAFWGTLGQHGLH
SLGMIIRLGSLESSSLWASTLSLPADAWGVHTSCRVDRATCQLLRWTGED
ISTVLTVLRAARRYLENCLKDPSNTKFRLIRVRSKFFFDNIGKVPGSGHL
MQALGFEHIAAAATAFSATEYGKPEEEEACYTLPLFQVVPSRLKRNIYRL
DVNITRLVDMSAS
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Synonyms
Publications