Naga_100120g21, gene2471 (gene) Nannochloropsis gaditana

Overview
NameNaga_100120g21
Unique Namegene2471
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:723860..731237 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100120g21
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:723860..731237 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016740transferase activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006259DNA metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2584rna2584-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2584rna2584Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2584

>rna2584-protein ID=rna2584-protein|Name=rna2584|organism=Nannochloropsis gaditana|type=polypeptide|length=2216bp
MAALPPSSSTPRASHATPLFPLDEDLPVDEMIAMCELAEAAAAAATDGAE
CLRHSRRVSEAARDMAGGDPGTAASPPTSTSALDNSLPAQKVLAEIRAHA
RISIEALFENVLELPVEMALAYRRRGIVRPYDWQCQCLQTPGVVTGERNL
LYSAPTSGGKSFVADVLLLRRAIHTRKKVLLVLPFVAVVREKVAHFKSLV
SVYNARKRRREALRIQAFHGNKGGRGFGRCQIGICTIEKANALVNKMIQE
GSINQLSCLVVDELHMMADQQRGYLLELLLSKLKFIKALQHCRRGPSDLT
TDAAIDNQGPPLDVQIIGLSATLPNLEEVADWMDAALFHTSFRPVELQEM
YKWGDALFAADGVCLRRLQSRRPPAEDPDHITTLVEETTRRGHQVLVFCH
YRKHCENCATLLAEQLGVLPGAIMANAMTRQKKEDKESDDTVKMRKALLD
DLREHSMSVHPCLLLAIPKGIAFHHAGLTDHEKNALEEAFRRGVLSVIVA
TSTLGTGINLPAARVIFRTLRPGGNRVFDISSYRQMAGRAGRAGQQKYGE
SILLARSPQDVKEATRLMTEPLHDLHSCLDPEQDGGRALVRAILEAIASG
SLQKNDDLDIFLHCTLALRQRIRHSPRLNSFLYYARDALRYLVEHRIVKQ
LPGPSVNAEVSTSQRAEHTPEQKEQTVMSTAAPPVPDIGSTVSTLLSPSK
LGHALFKSSFAPDEGLLVFQDLKHAQQRLVLDGNLHLIYLVTPVFHPLLP
DYNQLWKIYDRARRTDPVKALIFELIGFSEALLDRWSHQQPASGVLIGPL
LHLGSSEAGNHTARGLAQPIGRSIRMATGVVEGEQLMIMRARRLWGALAL
HDLAVAERPLDATAATYGVDRGSLQALQQSAASYVGMIQSFLTQLGWTLL
SRALEEAGTAVGGEQVKELMPLMQIPRLELSLARALYDTDVRTVAAVCSE
PVEHLADIIRKIRPFSAEKRGDGVAVPGLESDEMACYDEAARRLREAAHF
VLKKGNKIRRSKMEESISQGADPGSTSSLHGIHGDSTSSSDSDVDAYDGA
HGASAAFASCLGANEPIPSASTCSQSGRIQPDSCPGHTEIATLTRSLRCL
ADVPSKFFFETPVAMRHPKLRPEDYPMTQRVSTPTRSPTSSHHYLYIPDI
PSVPLQYSPGSPNTKKLESSMTLGGWRGKQLHDTHRTDFIPENLAFPCTF
VTAATVNNFTNFVNRWNESLCYSVVLHYRPVPLVSDWRGDVHAPSSSFSE
SHAYHRYATRLTPCPLVSGKLRHAFYTPRMENFIICGLAVSFDGQHSNYC
WLPPPFSRRPFEGLPCLGDDMACATSMSAGKKRKIRVVAVSDRSVCMVNG
EDKSSKSCSDETPTRSILQVSIMQGLPERPTMVVFAFVGYQPRHLSTIPK
ATSSVNEPAGGDGPNLHHVYQEPFGRQNIASYQYSNPAMLLCRRWNRLGC
AWFNEYASLQGWQAIKSLLAKKGTLKVVWDAVTVLATLRERNVSMAGPFE
DPKVGLALLGRDGPRRGASGVSNNGPLHFEKLDQACDTGRVDLLGAQAAG
LLQLRGAVEKMLANHQLLDPFRLIEMPLLPVLADMQFYGMRVDRSWFPGT
VLAIQTRLLLLQDLADAMGGCHLNLNCQDAVHHLLYVVLRLPVPPKWSRK
TKVWGEKCHSEKTVLGPVETEWLEGMVNLSPAVKLVLEWRQLSAALRNLQ
SIRNCIRPQALLGSHRVRCRVHPSGSATGRITLSEPALQQVAHEVLVRET
VRASIQDEIEGRRPLAHKQDSKQDGSSLPSYLFTDDISASLDQNYPVNTY
GYIASSQVSLERPKIAVAAVRVDSYLWANVSEKSNFQEGYQAMTSQFGTL
RCILNARISQPFPSHKVSHALAPNQVQHQSSFLLNPNSSAARLDSSLADY
WRSRGFNYSFEDAMRIRQCVIEFPPGVVLTYPADKVYRRPDPIHDPLKAC
HSAFDDMINPATVLKPRMAFLAARGCVLISADYSQIELRMLAHFSADPLL
CDALKRDEDVFQTLAATWRRVAIENVTRAMRDEAKQLAYAVLYGQSIAAT
AQQFAISTAEADKLHVSFLNTYPGIRKFLQESKDFCKTHGYIETLLRRRR
HLPGIHSRNIYERLQAERQSVNSICQGSAAEVIKLAMINIHSKLEGLHCR
IKKDSLGDVRDCRLVLQIHDELIFEVKEQMVTEVVQIMKDCMEGALQLNV
PLKVHVKVGASWGALA
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Synonyms
Publications