Naga_100036g14, gene2456 (gene) Nannochloropsis gaditana

Overview
NameNaga_100036g14
Unique Namegene2456
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:687280..689940 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100036g14
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:687280..689940 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL121ngnoL121Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G02410NO05G02410Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2569rna2569-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2569rna2569Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2569

>rna2569-protein ID=rna2569-protein|Name=rna2569|organism=Nannochloropsis gaditana|type=polypeptide|length=646bp
MSDTLPLRVRGPAGGSPVLLSNLTRASSISDLMKAVRNLLMLHESKSYIL
MSGFPPKTLFGDNHDRPLGVLLQPNEVVTVKEDGGEEPRVLQGHGLMKQK
RGVKAKGASGPAKKENSRRTDKNTVSKAALVVNAGPRIRTLHRQSGNGTG
GPGTGGENATRKRRRMNVGVSNEEDLGELLLASVGKGGGGGRVGRCMRAV
FRKAVEKNFDEAKAAARVAAVQGGRYSAKASIEERRLDGSCARLHVLYHK
GHGFQSDYRDDVELLSQSQLLGVVRSVLADVDGREMLKPANMAGCSPRVF
WSLMHHFNANSIEGGGQEGLDKGTEAALRWLVPEQDWAFLHERHRKLSDK
AKENQAQEEELQREREEEARRKRMWREARGAGRQRVVAADAHSKGKGRKD
PASGRTTSVGDTIDQAGTPCEEAVSEVLDRERRAQAAVARSHSFHGAPAQ
IVEAARKAEGREGGRKEMEERASLVAVDGESGEIDSDFPEEVSDAWVRVL
RSPSFMLLDCAALAGADAEELVLRLQKHHAAGAKPLAPSDPSLSEVQGWV
SACQNDELDEMMMRLAGGDEDLLEAMECVHVATPKDVRLWGMVPGAFLDM
LARELSEEKMAHVQAKLPDVEAVQVLKERAEKLMAENAWLESWGSE
back to top
Synonyms
Publications