Naga_100004g166, gene2410 (gene) Nannochloropsis gaditana

Overview
NameNaga_100004g166
Unique Namegene2410
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:575644..579350 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100004g166
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:575644..579350 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL121ngnoL121Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G02900NO05G02900Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2522rna2522-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2522rna2522Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2522

>rna2522-protein ID=rna2522-protein|Name=rna2522|organism=Nannochloropsis gaditana|type=polypeptide|length=870bp
MVLDIYAYAQLFGGDSPYEDDDREADKIYQAIDDRMDSRRKRRREEQLLE
TLKKARAERPKAGDQFTDLKADLKNVSMEEWMGIPDVGDQSLKFKQRKRQ
EVFTPAPDHLIESQRAALVDAAAPIDPRTGLQTPMSAGGSSSIAGLSQAR
ETVLSIKLDKMSDSVSGQTVVDPKGYLTDLNSIKINTDTEVGDIKRARLL
LVSLTDTNPKHAPGWVARARVEEQAGKIVAARKIIKEGCEACPESEDVWL
EAARLYSAENARTILADAVRHLPQSVKVWLRAADLEPTEAGKKIVLRRAL
EYLPKSVKLWKTAISAEEEEDARIMLERAVECVPHSVDMWLALARLETYE
NAKNVLNRALKELPTEGAIWITAAKLEEAHQKGDNVEKIINMAISILRQQ
SVVLDREHWLREAEGAERAGSPLTGQAIVRATIYMGVEDEDRYRTWTDDA
DSALQRGAVETARAILAYALQTFPGKKALWSKACDLEKAYGTPEALEQML
KKAVTYCPQAESLWLRAAKEKWLLGDVPAARALLTEAFKANPDSEAIWLA
AVKLEWENNEFERARILLSKARQRVPTQRVWLKSAKLERELGQITTELVL
LEEAVKSFPDHAKFYMMAGQACDEALHEPERAREYYQKGLSRCPHSIPLW
RLAGLFEERVHGFTKARSMFELARLRNPRNPELWLEAVRLERRAGNEKLA
ASLMAKGLQECPDSGLLWAEEIIHSPRPQQKSKSQEALSKCPNDPFVFVA
VARLFEATRKYAKARKWFNQSVELNPDLGDSWAYYYAFELRHGSETDKSE
VLKNCLEADPTHGEIWTAVSKSVENWRLSKESILKKVVAKLQESAVEETS
EPIVKPEMEVRVKLEVKDRA
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Synonyms
Publications