Naga_100004g109, gene2361 (gene) Nannochloropsis gaditana

Overview
NameNaga_100004g109
Unique Namegene2361
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:459461..465538 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100004g109
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:459461..465538 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005215transporter activity
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01840NO05G01840Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2468rna2468-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2468rna2468Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2468

>rna2468-protein ID=rna2468-protein|Name=rna2468|organism=Nannochloropsis gaditana|type=polypeptide|length=1960bp
MVSTAHQLRAILWKNILLKRRHWISTFCEVAIPVLFIGLLVWIKTICTKR
DAPNVAYACGQTKGFDFYAPSLSANLTGVPLLQCLQPPDTCVEPGYYRGE
LTELDPRLPPFYMEYGYTPSGKGYPFYALTVGDDSQLYEQVNSLLALQNI
SALANNPSPTLDEVTQAYFRSKAVLVVCPATASSPSLVAATQSLYTHLLA
TLTWVGPHEEAIVLLPSQAALEANVTAQGYEDSVKVAAAIVVNEVDPRGP
RWDYSVRVNFTQTFETVQETVGCLHAKCAFQYTVPTTQFLVNPFVKPAKA
EFLFGYTYTAFSTLQKAVDDFILNEASRRGPIETTISLGLFPEPAFHSDD
FLTVIAASLALFFVLAFLYPVSRFLRALVLEKETKIKETMKIMGLSAWAA
NLSWVLTMVAQSTVTVSLMTLLGARTAFSYSNSFLIFLFLLVFSLALVMF
VFLVSTFFSKAKTAATAGTVIFFASFFPYYALTGPGVAGIRTKAAACLLA
PTCLGLGADVLAAFEGGLMGLQWDNIFLQPAETNFSYAAAVGMLLLDAVL
YGLLAAYLEAVLPSEFGTQLPFYFPFLPSYWRGRMDEEPRGRHRGRRIFG
GMLDSNAPSERGEPLLTLTEDDFLSRGGMGDEQEGIDEENAPLVEAVEPA
LRGQAAEGRSLEIQSLRKVFATTSGNRVAVDRLDMAIYEGQITVLLGHNG
AGKSTTISMLTGLVPPTAGDARVRGLSLNHDMARIRQNMGICPQHDTLWP
ELTVAEHLEVYGVLKGVRPGRTLKDAVERMIQEVGLQDKAQVESSQLSGG
MKRKLSLGMALIGDSKVVLLDEPTSGVDTFSRRQIWGVLERNKRGRVMLL
STHFMDEADMLGDRIAVMADGRLKALGSSLFLKSRYGVGYTLVIVKKEHA
TPSAPIVEAVRGAVPAAEVISDAGAELAFRLPFSASPVFPGLFRDIDARK
DHGELQISTYGISVTTLFEVFLRIGEDRVSTRSKPCAPVASSYLPVHGLD
SAEGSASDTGNSPAIATKVDNRNVSFERHVKALLAKRYIYAARDRKSQCC
LLVLPAILILFGLSLIKLLGNPLIQDSLVLSPNMLNADLVPEARNPFPVL
AHSPASRAIMSEFDYDRGLYASYIDVASDSSDDAVDEDPFYTCAVGAKDV
LRMSRYLANTAIARTTGPASRYGALTFANSTDPTHYTYNILLNASALHGA
GVYMNLASNAILRNLVGSPATTADDQPLIIIRNHPLPLTHEEQRASFLIE
ANTASTFVLIGLSFISASIAIFIVKEAESKAKHQQIISGISLLAYWLANF
AWDVLSWLPSLGITLALMYAFGVKSYTTGQAGGAFVLLFIAFAPAATAFT
YVWTFCFSSHSAAQTVVLFINFLTGLVLSIVSFVLSLIDSTRAINLKLRY
VFRLFPPFCFGDGLLQLALCVDDVCPKITAAGISITEPLTPLHWDVTLAN
IIFMLVEALLYFLITLIIEHARAQPWIAALAAWRPKSWVLGRKTKLGPTR
RHTRKSTGKGAQGVATDVEGGEEDDYDDEDVKAEAERVLCGESRRVNDVI
RLEALRKVFQTARGPKVAVRGLSFGIPKGETFGFLGINGAGKTTTLSMLS
GEFPPTSGAAYVAGYSITTEQPKLRKNIGFCPQFSALIDVLTTREHLTLF
ARIKGLPEPSIPALAVAKMKEMDLLDFADKAAGSLSGGNQRKVSMAIATI
GDPSVIFADEPSTGMDPASRRKVWDVLSAIRSKQSSIVLTTHSMEEAEAL
CTRIAIMVAGKLRCLGTPQHLKSKFGEGFELEVKVRASTPAELAGVVQDR
LGSRRSFTLPDVKDACRAWGRPDWATLVCETGSGATIWAIVRDGAEVPAL
TLAEWLLAEESAERLCKFLKEQFGRGVRLIERASWLTSRFSLPARASSSE
EGGGGRGCTGPLSLADMFERLESGKAMCSIIEYALGETQIEVIFNRLCAQ
GQGGDQSMAS
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Synonyms
Publications