Naga_100004g54, gene2314 (gene) Nannochloropsis gaditana

Overview
NameNaga_100004g54
Unique Namegene2314
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:345868..350356 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100004g54
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:345868..350356 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01310NO05G01310Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2421rna2421-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2421rna2421Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2421

>rna2421-protein ID=rna2421-protein|Name=rna2421|organism=Nannochloropsis gaditana|type=polypeptide|length=1369bp
MSSTTLCTYHTWIIRKQRRRRRRSCLSETKFRTWMVCGTTQLHLAYFLIP
LLSYLFTTIAAFRPPASPWHGRSFLTLPRAVADRNVPASSGEEIWKSKYG
TTSAAASRPRSSFPPAAHHFSASPDRRRSGRNDRSKKEWERSAPEEFLLI
LTRLRAEENSGRAPLLDEETERDIGHVIKLVRALANRQWEQAEESAALLC
RSPLLDTVLSRMVVYAATQRNEPDLALEILGGMREKRIDVDAFMASLVAK
AAATDRRWMPVVEVIRAQLSSNPGGDLIMPGTPQGRRHGGFTQALASTIE
RGKFYSSSFLVDALLQFRMVDLFTAKVALKFYRFSRTPARGLPWITTARA
IGLIPDADLDFEVGRVYKSLGMWREAVALLSEMVEQKRAVEDEHVGVVLS
ACHQAGEWKECLATLSKMREWGLSVGRVSYLIVLRLLLEKRRLDQVRSVL
QQMEAQGSPLDAETARLALFTLAKRGPVYSSLEFLKLMPVFGVEPDLVSY
TAVIRACARFQQPDLALEVLTLMAKNGMAPDVLACATAMDALSGAARWDE
AFALFDGCRSQGLRPDIKCWTQVLGMATQAGRWDLFPAYLEAAVGEARVH
KTGLDLRFFATVINACAEGNRTDEALAVLASVRSYGLMPNVVCFTAAAKA
CLARRRWRDALGLLEEAQKEGVPADATLYRTVLGCCWRARQWQSVLKLYG
EMLERGLEVDSRMYTSLMDALAGAGQSELAANVLQDMVANGIAPVDATWS
AFFQSWYHKGEYGTPWKLIEELVRWEDEGGMDSNAAWMPRKVIVSDADQR
RPSADGSRAGSRQGPRAGLGTGPGPRTLADLMHVCARREDWGEVLELQRR
ITDMGLPPTATRAPHLVVRAYAELGRWTEAQQFLCDCMHQGVSTESTQNY
TSHDERASDQARQVPATENSRPFSVSWSRTYGALLTLCSKRIEPVRALAL
LKDMEDKQLAPDAEAYHAVMDACAQAGMKGEVRMVFEKLRARADLLPRVE
SFTIMLDLCAREGGKGEEALRLMDDLEGLGLTPDMLCFNAAMEACREASM
LETDPGEGRYRRAMRKWRDVEVMHTYNSEMAVLATRKGGQDGEASSTALR
YLREMQANGIPRDTDSFNMALEACARGGNLQEARTVFEELQAAATEEAQG
PSARPDIFSYITLANALAKDGRDSEAMAWLNHMVGLAVDEAKAVVGAAPN
KTKGRTNAGRKAIQPSGNSERLGMNKSSTSRVGTNILLADETPALPSPST
PIGDLEEADGFTPSSLLHLSSASIRKKTRWPAYYRNLWPQTVKTLSKNIL
VLARCASPREQATRCADIGKLLEFLDSHVPILNTQVVAEQLVGMGICSTK
HIKTLTGNALKMRWRENQV
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Synonyms
Publications