Naga_100321g5, gene230 (gene) Nannochloropsis gaditana

Overview
NameNaga_100321g5
Unique Namegene230
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:604174..611086 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100321g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:604174..611086 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL002ngnoL002Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G02230NO02G02230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna241rna241-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna241rna241Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna241

>rna241-protein ID=rna241-protein|Name=rna241|organism=Nannochloropsis gaditana|type=polypeptide|length=1721bp
MEGRVGNLEYLMAINAAAGRSMIDAIFHPVLPWVSDLKVQNGGWRDLSKS
KFRLNKGDAQLDSAYRHSTPPHHITESLSEITYYIYMARRTPLAVLRRVV
RADFVPQHYPSNIARMFDWTPDECIPEFFVDASVFASLHRAIGMADVSFP
PWCPDASAFIAYHRALLESEEVSARMHLWIDLTFGHCLEGAAAVHNKNVP
LRSGEAGTGQRVLGHDYKNPGFVQIFREPHPQRRSLRRGLNVLQAAVLQA
AACRGRESEERGGHASYVMAVQGVEVTGDETDMLRRAPTVPVEDRNLQQI
RDCVASPDVVQAVGSFAQKAKARLEPAYSLTGPPPLPFSSFSHSTPVSCS
PLQPRSPTAPSQAPTQLEQQRDDMFAAGCILAELCLGKPVMSIQDVASLR
QNSLSEGAMGGGDAAAGGEGRERDDARGGGWAGLQGETYHLPYHVRALLH
SLLQRDPTRRPRAVDLLRTEEGVDSDEEEEDGQPATREVGVGVPGARLLD
GPFPPYFQDMYRYLSTVYLHQSDGDFESISVTLSLAQQLTELPLPAFALI
LPYMLRVLDDPAPFEAYEDRSQHFPANGHASASTDERGTGNAPEEGDGGE
WPSGQQPVIPHEHVEVPVILRLNPFLELLGQKLGIRHTQRLLLPRVASFM
GRLRNHRLLRALFVSPVWSLLIRLGGTGGFLTHCLPFMLKSLGPETPLEV
QQAAYVAVFNLGAPDMLGPGLMARYVIPTLLSGVGAIRQGEGAGVEGAES
GTEAASRAASAWDEDLYQARALVNICREIDDDVLVSMVAERLLMEIIPTL
AQELVPQPSQAASLALLETVSVLTGLLPSLQPSSAIFHYCQQPSVPVQQL
LLAIPLPPPPAFPTPSPASSLPGPSFPSTSPRVAPALAPHSPRHHLHVQL
GRLVVALSTCVGAVATQDYLLPAINTFLGGFSDMYDQALFFIEEAGGELQ
EGGTVSAEGAVCAIEETRMAAFDVVEDLWRHLEAMYDEKVLRQLVPNGYK
LVAVWFHRLNGPARADREAAGGSRVTVLRNEGARRGRGGGGRAWRREGGD
VGERFADMVIEKGLSGLLWIANKSRKGFQRAGGEGHRQAASGMEVPGEAG
PEMLKDRIPTAVSKVLREESEEDPRGSPVRRELEEGEEGEEGEEGECLQM
RRVSTAGKDVLLPISPGSALSSTASPLSLSPVRGQGRASHKLASSDEEEE
EEGEEEEGEGHEDDAELGLWGAASSPSRSFHVDGSIPHGFPLVANGNRGA
DARSGRRERSGSVTRSSVGPSLVSGIPFLKKKKDASASLVSTSGSPSRLT
GGRSAKREAWSSSVSKDHVWLLGPLIDPPRLEAPEAVADAGSSWPIHLCV
QTTLQAYKSGSSVRSLAVDPGETLLLSGSRRGVVKVFSLREHPVALSQMG
GGGAESHSESIFSLAFMNGSDQAVSLDGSLLIWDVNTGAVLARKEKYAPE
IGGMPLSYMAVDVLPAGGGVGVGDSRSTGTQQQHQLLAATQTTLYHLDLR
DRASASSASMVLTQASEWGVSSSCFQDRGIGAALQCVCAHDDAHWICAGS
SNGQLCVLDRRTGEIAQAWQAHEGPILRVFPWGRDKVLSVSLDQTAVLWD
IRHTIPRDICCLRGLPDSQSGMTLLVHEFRRSSASATAPLISGLGVTGTK
RPHVLMSFGGHKGVVARMPRPGMDVAAKARYFLSPNGLKLRAKINVQSAA
MLPLRKLLLVGCDDGNIRVCT
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Synonyms
Publications