Naga_100004g6, gene2271 (gene) Nannochloropsis gaditana

Overview
NameNaga_100004g6
Unique Namegene2271
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:231868..237047 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100004g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:231868..237047 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL119ngnoL119Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G00800NO05G00800Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2376rna2376-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2376rna2376Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2376

>rna2376-protein ID=rna2376-protein|Name=rna2376|organism=Nannochloropsis gaditana|type=polypeptide|length=1588bp
MPQARTALSKLILLRAMFVTILAGVDGDGRRFDRFHFLPPPRRAPGRLLA
IPSPRTSFVALPAATPEDDNAPKVSVGINSGIAATNLIPPAPPSSPKEAK
ALVRSPREGRASVGRIIPFTRGAIMRHKQASPRSNPSRPAEDEERRAVCD
LSPDLPTFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAY
AGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGG
DVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMLSA
YVAPNANTYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTV
YAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLR
RREAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLS
TLLHAYAEAGDPLGAEAVLLRVQGKGGEKWDGGEFAGLSLTVLMFNTLLS
AYAARKDVKGAEQVLARLVAEGERAGEGGNLKPNAITYNSLLTAYTNAGD
MAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAEKMVAYMQEHG
VLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEG
YVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAFTRRRDARGAEKILD
RMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKD
CEPNVHTYSTLMNVYARAGLAVGAEGVLTRMTAAGWAPNVITFTTLMTAY
SRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMGLREGEVEERRA
KRVLQVYDTMRRSAGKGGGLEKAPDEATYTVLLTCLLRFPKRLTKEVYKL
ILEDWRRLVPTRNRSDRNYQSFITILAAMGDWEEMATVFREAQARFQKGQ
LSPREYSKVEATFRFPRFRDNDSFCQRSGVCRKRKGPPVEVLMGRDEACN
MVYRARIDIKCASRQQEVWRAASRRFRHLYASIRSLFSGYIMIFGPVGRS
VSAVATFALLFSGIASSHLAQVSTSSSSSTMEMSSAASKPRSILNTNTNM
RHAGMSSSSCRFLKRVRGGAASPKASSIPIKTTSHVTAGTTEAHHGLSVT
SLAINIMADLCPHGMLPLAFGMASEGGTGLVPALSLLVLFGSLSAYTLIS
IARACEATGEYSFRGIWSRTLHPSTAWIIDAGITFLCFGCCIFYSAFIGD
LSAALAQALGAPAVLHKRWLCLVALHIFPLWPLCLMKNLSALQYSSIVGV
FGILYTTAFVVKRQCDGSYGPSGHFHALIDAVYRPQTPSYSAFEKLFRLG
PGAISLMNMACVAFTTHYNGIAYYTELKDRNLSRYSGAVGLGFLASFSVF
ALMMVFGFGTFGFAAQPLLLNNYHRTQDALATGSRLATAFSIMCGFPLMF
AGLKTGFFSLWHSNVESARRLSPRLRVALKSDTVIATVSSLLLAAICGIA
CLCTEEDVGFVIGVIGAVLGTSVVYIIPALLNTKLLARVKDTGVAKPEKR
FNQGLIVIGVVFALLGTYMAIDDQFGIFSGRGPKVHMH
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Synonyms
Publications