Naga_100131g12, gene2066 (gene) Nannochloropsis gaditana

Overview
NameNaga_100131g12
Unique Namegene2066
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1041403..1047468 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100131g12
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1041403..1047468 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL109ngnoL109Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL105ngnoL105Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G01110NO04G01110Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2163rna2163-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2163rna2163Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2163

>rna2163-protein ID=rna2163-protein|Name=rna2163|organism=Nannochloropsis gaditana|type=polypeptide|length=1743bp
MSSPLSPYSSTFDVDRYSSSRRHQQQDWGTAHSLSPSQTPYYLSYQGSSG
PSIHFPFERRYSESRLSHVSAGARASPLPPLSPHRSPSYHRSYSLGYEGD
LTMQAGQEGSGGRCHPAVLVPLLVGEGPDGVPDFVKLEEEAYERSGGLAA
LRVMATLTWEDVSAKLERPKGMRLEEAEDVGEVWRRGAGEGGEEGDGWGE
DGSEKESEEGEEEGWPVGDGGNDAWSGAGLSREGRGGGREAGGLSVSQGM
KATGRQEYAALVDGRGEALEEEEGNTEEEEGEEGEGEEEGDEPLPDCSLL
RISEGNSTSAQTDGEQAGGRWTTSVGSRFHPLTQAMWERNIQWGTGRGGE
EEDEEEEGKGLEEEVLSAEASADIVPSPQAGNAPVNGEEERGRDGGGTEG
EGKGRGEEEMGDLRVILARHRADETRRERLRWILAAKRREAAAMVSLGAG
ARAAGLGSEQESSSPRLSLYESTLAEEAERVLQAPFPLNAELNGQRWTRN
IIWGKPKVSQRARSLSRWLPGGGGVREQRPGPRSQAPLPWDRLIIDRNDP
RIYWETPSLPRTDLHALGLMSSTRTASLTPEEQQRQQQFGRHRTLQVPSI
EHAECALRHETTIADPARLVLHPDVLRSFHRPRLPLRLQDLSWTLRTPKD
KSGQAGGGGRGALAGGHPMSTRTIRTTKDLNAYEGELVVVEYPEERPLLL
SNPGMASKLLNLWRLSPQNVEAERAMALERHAAGLGGGGGKSRGPPRITR
ENLGASSVAMDLDRVHAGVPDFKEGQTCVLYPEDPSPFIGQIEDGMRQLA
LFNNLYKAPLFEHKAKPTDFLLVRSHPKHVREPLTGESAGESECYAVREI
PRVYLSGQMEPLREVFHPDDGRFREFRDRLIKLALVVKLHGGERGADMDR
RVSVIDLVRLFDGLADYLPDAGPGRDKEREKAVLVLNQLKQVAHELQGKH
TENHWSLNNDVVVEDVLREISPEEVCIFESMCSGVRRLLSEGISIVGRVT
SFAPARIEPILARNLQCLLQDRQARAEKARRSAELLKGGERGLEAEEVAN
MLQVLYEEVRQLIAVGAYLLDELYLAPWSLTHFYHAITNEKAYGGIFKLT
GLGDPSGIGEGFSFLPRHQREAGRSFKEVLPTLDPALQEIIGETPPVRMG
VAMMNKILTHVWSVPHLRRIAQHRLSTAGYGAEFEEVMQLTRVPKKVRVQ
VVLDVDAGEGAGGVRAGMLEYVAACDRIWNKQLNALTDESGAFGDEEGMA
GMELDLDDPEGAPEKGQGQGSRAGWGGGMEGGGKGPFETEADALAVQREL
AERARILAEQRQEAEIARQQQALMAGVALPTWQRPRKVVKRLIKETDVDG
TERYRVEFLFQPEEVERVRMQRAEELEKLRKKARRARKREAAGLAVGEEG
QAGEGDEWTVGGNKLVLSVQGKQKASKRKRASVTLNISSLKKMATEHKEQ
QQQKKRAQDEEARMLYSRQYLKLGARGSEGADREGREEGAGGGSGSYGRK
TQRKPHLLLNLQFDVIYSGVETKPYAKPFKRLRGRGMDLERVKKKITDYR
YESRQELLDDFATIVRETVEAEEGGGGGVLLEYVRAVQADVIEGVRSLDE
SSMAALEAEIVVQNATSIRRQRKANKMKGGRGGGRGRGGARGRGNKRESK
GELQVGGTEGIAGGRGILLPPPPSQEPPPVLLGPLSPPLGMDGGFGGNRG
GEDQPLIFVGEDTGGGGQLAPSISLPGEASDSGEEEVLQIDQL
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Synonyms
Publications