Naga_100009g14, gene2049 (gene) Nannochloropsis gaditana

Overview
NameNaga_100009g14
Unique Namegene2049
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:987244..992535 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100009g14
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:987244..992535 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL109ngnoL109Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G01330NO04G01330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2146rna2146-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2146rna2146Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2146

>rna2146-protein ID=rna2146-protein|Name=rna2146|organism=Nannochloropsis gaditana|type=polypeptide|length=1473bp
MSIALDKPIDVWASAEADDVASLRTLMGEGGGSENLDMYVDERDDHGRTA
LHAASSKGAESAVRFLLSRGANPNKADRESHWTSLHRALYHGHLRIALLL
LRAGAVLGDELTPWQAGHHLRGGKNNGSRNNQTTTRSFLDKKESSQSRKD
GVDKDGLTPLSLLSWRLRKHLQEAVRENKGGDVVTFGKADFPLGYPLPNT
SNVQKPRRVEALADVAVVAIAAARHHSVVLDKDGRVFTWGHGRGGRLGHG
DENPQMFPKLVAALDGLRVVKIAAAENHTVCVTDQGLVFSWGSDRFGQLG
VGGSSAGHGTARLVPRRVEALRRCMVADVSAGATHTVAVTREGEVYTWGG
NKSGQLGYEGVGAIGDGVPRMVSLLYHRANGKDPRRAIQVSAGCSCTLVV
VAGAGPYGPNKVFQFGYGSHVPIRVDFRPAEKAQRETGKRKGRGEGRGNS
GSTGSKDMFWAVPGGACGGARINVVQVSAGRHHNVALASTGLVFTWGLGA
DQLGLGVGGAGQEEGGVSHTTCPRVVHGMGQDRGVFVSASAGHTCVVSEN
GDLYSWGSTDGKQGILGHGHGSWQPVPKRVVGLKRGVKVAAGPEHTVVLL
LASSPALPHPHAALRAVRSELVAGKKVCEEGDGEEEADSRSSSPFSDTRS
EADGNLFEIDDVETFKPLSHGSDVMGSSTEIGHPVPAVQPNPSLKELCER
TIAAQVDMRNAISVLAHAEALDAKDLAGFCVEFVQRNLDGILVAGRPADL
DFLLEDAADDVNTLFQDAPSSLLANTPHASQLKEQSSASAGGEATAARPS
PVAVMLARVERGQDPTLEEALRLERGLKKRMTQVVELARMEADGTTLSPD
QIQKLSRRSILEKEAIALVPLLARLRMKDQARTVGGRVDGRGIATEASCL
VKEQKGPSGGELIGEHPLVSGFTPDKHGAVSAYEEKSFLTPSPTKVVYSC
EACHVTCATESIWQGHIKGKRHSKCVAKAKAEAASKQAVAEEETARVDME
NDKWQRGVGLPPPPPCPAWKGSNGVLKTPPRSAEADPTSEATQWGAQVGP
ATPLLTPPSGVLERRSKSFREILEEEERQAAMVVRSGRRRGMSVSDMNSS
SAINNSSHGKPLGHTISSPSSYGRRTTSSASTSGKNYAVLQPLVRGANVG
GHGEERKDAGEGTLLSAYLKLTPSAPRPVAPALSSASRWASGRQNDGSGS
ASNVDHMSRARSASVGSSICKDDRKASDAMDGCNDDAANGSSPTLSGATF
EGRSVTTPSFEEIMAEEERKAALVRFSGNNCPWFSGRRERSDSFEVIQKQ
QLEQETLREEEEARAMAEALAVAAAEEEKEREQAKKEKQILRKQRKQSKE
KQGKHGQNMQKQYPPFSTSDRPLSSCKKKQDQIDKASESNVTHNVQAQGA
QEPVDREDLDADAISDQLRTPRFCEKVEGHCIEKSSGGHIHDMSRGMQSC
KSSNGRKRRGGRAKIPGGSRAAT
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Synonyms
Publications