Naga_100009g72, gene1998 (gene) Nannochloropsis gaditana

Overview
NameNaga_100009g72
Unique Namegene1998
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:859308..864549 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100009g72
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:859308..864549 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005215transporter activity
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL109ngnoL109Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2088rna2088-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2088rna2088Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2088

>rna2088-protein ID=rna2088-protein|Name=rna2088|organism=Nannochloropsis gaditana|type=polypeptide|length=1691bp
MKAIVDDVGILISGGLLICLCARLIAGVCGRRRPHIAQNTERRQQNESLP
TKTFNYDGKNRSKECQGSLESSNALQEPLLPTPMEKCGQKTDVYLKRNKG
LAWSREVFGAVLFVIYFARGCMLLRKGDADTAGARLILVAGGWLVLSQLE
EMTGLGSPPAASICRRMERSRGGSPGPSNSIQTPTLPQSPAWLSLWLGYC
FYFGLAVHPYVVLAQEPGGLDMAKGIACVQLGLAVLVMLLLGLEAAMATM
ETRRLSSGRVEGVLGPVESKSARWYSLFVELAVPPSPEQKASLFSTLLFN
WINPILDLGKQKVLALEDLFELEQDDRSSYIWRAFSPHLRSLEIRHSQHM
LHRRDKVACNRQEGEQVGRHSVGIGPNSSASAFSGWGLLQALLRTYPLTF
TAVSFFQLVTSLCAFGVPLSLKYIVDFIGRYKSADPIPVTLYIAATVLFL
CPALAALANVQQFNLVRRLVFRCRAALVGLILRQTLRVDGAASTYSSGQI
INHCTVDAGNSDSIRYLVFLWAVPLETTIAIALIFWVLRCWISGAVGVAL
IVFSVLITVKLSERLRKAQRALMKRKDVRISLLGEGLQGIRVLKLLAWER
DFLKKLEDARGHELRALRSFLLMRCLISILWSSAPVIVSALTFLLHTMVL
DQPLSASQGYATLALFGLLRDPLASLNTYLNSFVKGQVSLSRLERFLFEV
PLLQKYEGEFLTDENDEKKEAGVVVGKRGLLQTDAPRPSGLRPGVVILNA
GGLGGTGHAFAWGESRQDGRGGLLLTGVRLHVAPGEFVCVYGPTGCGKSS
LLMALLGELRAVPPATAENKASLPAHLPAAQPWKSSCGGRVSYAAQKPWL
LSGTIRDNILFGYPLDNARYEAALEACALREDLEALSGGDLTEIGEKGVT
LSGGQQQRLSLCRAIYCPSDVVLLDDVLSAVDANVAQHLVRHCLTGPLLQ
GRTRILVTHQIALTLPRADQVLVLGSDSRVIAQGNPRQTPDMLDKLGNIA
LAVDRDGKGKSNWAIGDTGVVGKSQEHIPAEVGAPRLTATAENSVATRPT
ATLITATGRGKQLIKAEQKAEGRVKWRVYLAYVQATGGFVFAIAALLTFG
GVQALYYFQNKALGDWVVRLEGGSTSHRLENAYPYLYFSAANIVVMVLQA
LLTSGSSLLASRRIHRDMGRRVLRAPLSWFERTPLGRIQNRFSSDMDTID
VDMMNTLTNFLSRLAAILTITSVILGNMAPLALGMLPVLVISCYVGYTYQ
CSARELKRLDSVTRSPIYSHFSETVSGVSTLRAYGAQRRFLQESDARVDR
NDRVYHHLWSANRWLAVRLQLLGAAVVGMVGVYLLLTLGSVPGQTAGLVL
LFSSNFSENMNMLIRMQATLEMDVNSIERTAIEYTQNLEQEGAEIVRACR
PPSTRWPEAGELTISHLRLRYPGTDTDTLRDVSFRVPPKTKVGVVGRTGA
GKTSLIAALFRLVEPAEGSVLSIDGQDILKMGLEDLRGRLAIVPQESILF
KGTVRSNLDPFGEFDDAKLWAALEKAQMKGRVVKSLDDRVSEGGENFSVG
ERALLCMGRALLRRKGVLILDEATASVDAEADAALQDMVRTELGECTVLA
VAHRLKTVAYYDLVLVLHNGQVVEMGAPRDLLSRKDSAFRALAEQTGEFE
LLCAMAREGVAKRDSPSLPLSISESSERDGGSADGYFSPEL
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Synonyms
Publications