Naga_100009g81, gene1990 (gene) Nannochloropsis gaditana

Overview
NameNaga_100009g81
Unique Namegene1990
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:836687..844230 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100009g81
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:836687..844230 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016301kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL109ngnoL109Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G01910NO04G01910Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2080rna2080-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2080rna2080Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2080

>rna2080-protein ID=rna2080-protein|Name=rna2080|organism=Nannochloropsis gaditana|type=polypeptide|length=2476bp
MRWDSFSNLPGIPLRSRGAVSSSQESSGRRRRRPWDRQGAPPAPQQDKGG
PDLESGPCVSSNSSRSTGSGNDADDERECTSWKLRRARLLQENAGFIDTH
LVERRLWCCGGVSPGWKAGRTDVPLSQAGAAAVAGNGVASSRKSHLAHPL
VHRFRDPRVESAFATFQANSQGGTWWALAWTLCLGALSVSSIALVRSFLH
VWTTPGAEDGSLQAFDGIVYTFIIVVYLVRSHRLFRIRRALLAGHPPPPP
PAFPPRSPLLRAWRAFCAHHYVVLLLVVPVLVERAFHRPMLMALHLAISC
VFLLTTAGLLLAHAVAYAVLGCMAYLLHLLLAHLDLDGSPAVWRENGVLA
HTCALILGLCLVYFLARSREMILREHFKVQFLGAYLFQRGRLEQALADRL
LLATLPMAVAHHALDPRDLPPPSTFPTLAPSLYFSRTSAASYARSSASLA
RAITPPPSSHHPVPAAPSPGNPPGVGPPAMSASGTAPFALHANTLGRRGS
EGMVPSAPPPAVPSTDGNPGAGGVGAGASCAATSTTVAGSERASGGTSTP
LPALASCSAPSTSVPVGRTTSAASSLPAPHGEEDRDGRVPEESVWVYPSP
RLVRDALARYKGRLPPSVHPFQIPPASRFVQRKFCTVLVAKAVQAGGSHL
LVPPLRLSRALSEFDLVVGHHKVTKVCNTGSSYTASCGLFESWGSARRDA
LAAVAAASDLVAIAEALGLDLCVGVASGSVVGVLDPLSHSFYDLVGDVVS
SATLMADLGMSGQVFVGDSTHQLLDHKEWSFRLPRVGTHNVSVRLLNGHE
ETLKALSNPYATSWWFEHRQQIVLDELAAEDGVRDASAHGPSPEILGLKS
SSVTAVSQEAWERGLEEGSLSGRTGGGSPQACKRGREQPDGKNPRPFTIA
SVYELREELEASGSGERREGKGHQSLSVQPWPVTLETLDRSVSDGTSGRQ
TRAEVLEEEAEFRAFVLGQRLELEVLLLALCTTTFLWTTNLYSWTLGPFL
VLLVVQCALRWQHSDNSRLASLLVGLYGCAVGALLLGMAFVNHDVFALSV
LRGVFLLSPIVYIPARKASALAGAIFAFLLLNHIIIWIASSSPRPDELHY
VLGRYCWYGALVAVLLTYHRQTEHLGMTLPSQVYPYVQELQAFASVLLAR
TDAVVAKLVPSNVDVRRLLLHAQQQRLGGHLALRTQAVIVHIDFRALSKL
DGLVSPLQLCAFQNRLLGMLDGAVRLFSASHLWHSGHVFVVACGLDPALS
QSLPSSAAGSGDRPPASTFDGNGHDPVLQALGLSRFIKIKIHEFNLKNHV
SLSVRVGIARGTITLNSASTERFDATGSPILIAKVLALRTLATMVTADIA
LHVQRHAPPEKLKTITFHPVTEGQIPLLHGNTVEAVEVTLESQLPDHLTV
GPRLEDFEILGLLGSGGYGSVHLAREGHSGGLVAMKVMFKRRRGVSDLMR
VELNVLAQVQHPHVVQFHYCLQTKSRIILVMEYIRGGTLKALLKEPLSLR
PPPRVLRRWAAELVLALGYLHSLHVIHRDIKPDNCMVGEDGHLKLMDFGL
AKVLQRGTEATTFGLGADPAGGIKSEGVGGEVAEGMIAGASSGGTSGAAS
TTGLVAASDSLQQVAAANAAWSDNSGYTDIMPLMQRLMPQRSYQASASFL
NAEDASAGSSAAFTQQAPFRVLVVEDEPFTRLITKSLVKSMGFQPLTAAH
GKKALEVLRASLRTPQPVDLVLLDLELPVMTGPEVLAEMQADVSLRTVPV
VVLSVDDRTADIAACMELGAKDYFIKPIRMDMAPSLLKFARDRRREMACV
GAQNRLSEGREGEEEDEEEEEETKGMGEDKKRQIDYLADKKQNARDQASH
GSDAEGIESKRSNQSQQKEEDGEDYCHPKTVRSETSFQRPVAAGKKDQRE
QRPTEQGQAASQQEEISSKESQAGKGRGIRRLRQQPQEDQKGVQPVPDER
QCHTSADLMWDGSPPNTATAGAGRVIIEDKLLPGMPTREHFSLVGTPYYM
CPEMLDRQRYGPALDYWALGILLFECFAGAPPFTGETPEAVFTAIRARNI
PWGKLRKALEGVAEEALGRREDEGRIDVGHLEDLVRRLLEPDQFQRLGAG
KCGIEGIKSHPFFAGLDWKTLSTQEVDYRPAPRMYSVMQCQQSLARRERQ
KDKQQHKGVSREGGQTGRMQVRSSRAPAGIMTRRRLGLSVGMDASVDEAF
GEGVGRDEDAQLTMTSDWRALLTTTTASSLSRYEELSEVGEECLKEGEDK
WEEGKEEKEKAKEEVKEACSPTSPQKAANMGVEGCGGGATKSSGKGMQHY
RRLFSQQTSKLNFKKSKASGLPRAGEPFCTSTGRNTSSGGKERSYISFSS
ASSSISSFSSSRRHGRRRHDRLKGLGHTPFNRERWVELMGEAGDARRRKK
GESLKVTSQKECAGVEDCKGSERIKQRSGPSRSGEGEDKGDSSLRKNNHA
CRKGVDKEGVLDSSYIWGKIEEEMRR
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Synonyms
Publications