Naga_100002g14, gene1918 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g14
Unique Namegene1918
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:678589..683862 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g14
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:678589..683862 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL111ngnoL111Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G02910NO04G02910Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2007rna2007-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2007rna2007Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2007

>rna2007-protein ID=rna2007-protein|Name=rna2007|organism=Nannochloropsis gaditana|type=polypeptide|length=1346bp
MKWREELAKKMAQARKTVEAELGGAGGKAETVLEDFVSKLEKLWGDSGKA
ISKSQKTDCEKKLDKLVKAAAKQLKEAREDGTGLKKKSEMIREKVEARKQ
VDEAEDDAQLLANTLSKFKRTLVPSLMGLKNSLKSAHGRMQWMLEVIKAA
LGQRPRDDVLILDCLFALIETPMFVAARKELKQREKERKKAKKEKEKEKE
GKKLKKEKQERGEEEGVAPLSREGELVARFSETVDEVMGLLGEIEDVIEF
QLVKMANRLPPLSRFTFGRSLDAWQKRVLGLIDERRSVIVCAPTSSGKTI
LSSYVTMRADKILFVVPTEPLVWQVAAMFYKVLGGEVAVVTNQIVYNPKR
EDPRDWRVIVGTPLALESALSKPRGREGAEMLGQQDFSTFRGGFHEFEYV
IYDEVHTLDGEEGAALQRIIKAVRCNFLALSATIGNGPALRDWWQGVHEA
HVGQERAEVEAMLAGRGDQTREEGEDYDMLARLVRMRYVHLSPAQGPDVK
ALKGRWTSVRAKCRDAARASPPAPQDVFVPVPSSQTVVELVDHKARFINL
QRWVWAGNQLKTLHPLAAMSLGFLKSSASTKETSGQGPDQSGGGLEEAAL
PFTPYDSFKLWEALRDAFEEEVVEDVDPEEVLGGKRITLERSKEYEDLLK
AKLMALASQGGEAEAKVEKILKTFAPPPDAQANEDFRLVDVVLHMKEAGF
FPAIFFRLDTYSCVELFKQLLVKTAEEEKARHPTYYADLTKKKEAREVLA
RKVRDAAEKRKDKKVKKRVEVDERGNRVEAERDDDDPADAVVSVPPPVDD
TAPHPDFVFSSPVNRITDSELTEILEKLSKDNIDAEHPYIKGLRRGIGLY
VDDSHTQEYRRVVQSLAQQGKLAVVFSDHSLAYGVNMPFRTSTFVGDDPE
LLTPLMAAQMSGRAGRRGLDEQGNLVYLDMSWERIKVLMLGCIPAIRGRE
PRYPTMVLQHVLSQYYNRTSALKSDRVRFFPEYINEARMKAIAGPSLEDF
LQARERHATNGAYPGPCDDAYYRSSLRVLEALRFIRVERPSTSPTSLGED
RISPSGSAEMTEAVEEEGDIKELIKAPGVLALLWELREYPAEGVRVVFAL
PWMMGKVRPILEKKTAGYVFKQWSRRVKIDDVERDFLIMLLPLIDREAPK
KGATPLHEEPFVSSTPGRASILKDVEEILRRSQARIDLIEEADRGTLKLE
RQPAPPGEPPCPLDSTLFKLLVLRKTPGSDPSLSALTSVDWFRLKHRLWK
VGSVVRLMHNCLGKGGGGSEKYAVFLLWKTFRRIWYIMRDLMVYGTDYVG
AGRGLGEEQDGGEEDEEDDGAGEGTTSTAVSAQSIGGGSSAGERTG
back to top
Synonyms
Publications