Naga_100002g17, gene1915 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g17
Unique Namegene1915
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:666640..670491 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g17
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:666640..670491 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL111ngnoL111Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2004rna2004-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2004rna2004Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2004

>rna2004-protein ID=rna2004-protein|Name=rna2004|organism=Nannochloropsis gaditana|type=polypeptide|length=1283bp
MAHRARVLRSPAQQTIRMHYANCNTYNADFDGDEMNCHFPQDELSRAEAE
TIACTDEQYLAPTNGKPLRGLIQDHVGSGVKLTGKDCFLSRADFQHILFC
TLSGLPGVEVVPPHGHIYMPAPAIWKPQELWTGKQMISVLLQHLSEGLPP
LNLDFKAKTPAVAFGVDQEEHEVVVRGGDLIRGVLDKAAFGASEGGLVHG
VYEFYGPRFAGRLLTALGRLFTVYLQFAGHTCGVEDLVLSRAAEQRRRAL
ITRAGRLGGLAMYCYTSGTAFEPPPLPPLPSASAQAEKDGASADGLSAAD
LARVQARTAELLEEDMRTGQVTQAAAIDNFMRTVLSPVSSDIIKACLPDG
LTKPFPHNAFSLMVSTGAKGSTVNQSQISCGLGQQELEGRRVPLMPSGKS
LPSFPPYDPSPRAGGFIVDRFLTGVRPQEYYFHCMAGREGLIDTAVKTSR
SGYLQRCLVKGLEELRVHYDNTVRDADAGVVQFLYGEDGVDPLHGKYLDG
QAPQMTALARNFAALLCQYKVDLKFLERTGMDLKTARAMHEEIKAARLEI
KEQAQKREQKSLSAVRPAQLKVGNMVLTKRLKRTRTEWITGAWLPGWEPA
EVVKVHGAKGASRPATYDLRYISDGKVAKRVPRRIRHTVVEPSRPAASAL
DIPPPPPSSSASQVDLIRWPYLPDPVLGRAKTQLGLHLGAISERFQDAIE
DYLGRDPEHLFQKSEMGGSKSKAGLELLLWLKYMRSLTSPGEAVGSIAGQ
SIGEPSTQMTLNTFHLAGHGGANVTLGIPRLREIIMTASRNPKTPSMTVS
LCTSISRSEAQRLSARLRRLQLLEVVHHTQGSVLVKERLGRCASSGVTWQ
RYYTVSLRLHDEEVLQEAFGLSHEEMFEVIATRFVRQLLASVTAELRKVA
SRDVVRLLKERRGNAADAEARESGEASEDEADMTGLIGGRGPGMKAAARA
GAKTSPKLAAMDVDGEEDEEREEEEDGDEAQGTLSFGRKEERGEYEPDEE
EDPSEVVGDDASGIEEGVENSGEGQLSEVPAKQRRSGSRFDDVAAVAKID
HPFFENLRFERETGVAHITLKTRASHRRLLMVSIVEAAAERCTVHVSKGI
AQAFVVEGKDGRCSIQTEGCNLSELWEVGDAALDLNNITSNDIWAMHQTY
GVEAARATIVKEIKGVFGAYGIAVDPRHLGLVADFMTYQGGFRALNRIGM
SEVSSPFLQMSFETTATFLTEAALNSEKDDLQTPSAKLVMGQPTGNGTGS
FDIMIPVDMNRKASESYVEDPLKEEEGDRMEEA
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Synonyms
Publications