Naga_100002g42, gene1887 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g42
Unique Namegene1887
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:606101..609058 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g42
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:606101..609058 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL106ngnoL106Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03480NO04G03480Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1976rna1976-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1976rna1976Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1976

>rna1976-protein ID=rna1976-protein|Name=rna1976|organism=Nannochloropsis gaditana|type=polypeptide|length=894bp
MDRRRWSPCTQCAGSAAQSLFVLILVVVSCVEGFRFSFPTKRNRLPSPKL
VLFATDTDAKLGGVNVTVPSIPGPNKALTNNDEEKIALTRPTSEVSSRPK
VGVSAPPSSSESSKVVAAPTPAKSTSAPVKDPTPKPIFGSKKSVDAIPGE
APTKPKSADKPQKPVKPLDRARLIEEIATAIGGTAVGFILGTWLERQAQS
DEATLTAASGATVLGLVSYIVSRADNLAGVAVRKSLGGATLGLVRGATGA
VTGVVSGAINGIKRGVQQKVEDLKNTPGRILDGIKASLNARVEEVKALPA
RTADAAKRKAQATAEEIAAVPGRTAQAISNSVVESVEGVKAALSETIDGV
ARAPSELMARVTGETPSSPLPRPKPSSTPPLPDKPALTPPKAAATLKIGG
KPISAAASPSSSSPRSVPTKPAAPVLKFGGQSPSPRSTPSKAISTSSLGK
GGPRREAPASPAPVLGGAKGQETKKPLTPSKPKLSASTSATSAPQVSGSP
FPSFKSGPARSKPATASQTRNKGKEAPVLAKKEGSSVFGRLFAPTQEPKA
KVPPPPPASIPAPAEKPQAPAASPSLFAGLFGSGASASPKKAISPLTSPK
NKPVTAAGKARTAAPPLTNKPVTPAPLTASKAPPRPPSTAPKPSVTPKKP
LNYKFSPPVRPKSSISPLLLKPGAKASEKVEEENNAAPAPKKIVYRSPPP
PSRPALASFPKIKSLASAPPKETPVSPPVPDKASGAGPFAGLFGGRPLSS
SSKGSNSIGKAKAGKAPSKPLPPMAMPESAEPALKSANDSKGQFTGIFGT
SPTRTPSPPKPQIMKPAAIDDKKSSQDAGASGGIGVFGGLFGKAKVETKK
AQQVPKKPEGSAKSGKLDEVSLLSLKQTIRREQKQALKSLGKKN
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Synonyms
Publications