Naga_100002g87, gene1845 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g87
Unique Namegene1845
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:499060..506416 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g87
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:499060..506416 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL106ngnoL106Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03080NO04G03080Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1932rna1932-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1932rna1932Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1932

>rna1932-protein ID=rna1932-protein|Name=rna1932|organism=Nannochloropsis gaditana|type=polypeptide|length=2123bp
MEDLTDAGTTASIEAIENAISQASAVSAAPIDMDVAQNDVGFQSEPEKIS
GALLPSSQSQSPFLPANDGQAYVNRAPEIKTEAEISMVDPTGSQAQPLPA
STASSAPEKKKYASRPPRLGDSFQAIVPSLGSEVNHEHRTRTSTGLISKK
SGREPVPENDADSRDLRPHQFSLRDGLIWMPSALPEEEVDNYLIMTRGLL
EQTSHSQDRQAPPWRRRGVSSSGVPLVSAKEAATTAGTGEQSQGAGGLIP
LEADERALFYLYQRDYGVDRASLSLMSELGMGKEYKFLHALDTLYQSGAS
AAALDRRDRTTLVGSFSSGGVPSIGYSRGARPAQYPYAYYYPDRAPSAAR
GSSTEEDGGHGGKPEQQECLGEDEDGPVESREKKKRSADKTETRKQYAVL
VERASSLWRAVEACRKKGSSGSNLNLNGDGGKVTSACASTSVSDRPRQSD
ILTIVHEIATLPNVDLPLGDSLSKELDKSFGGLKEVLATSRKFVAKVHDA
LNTTAAPSSSIDELNALLEELRQQPILLREEVQLAQIIADAKQWEAKAKK
SLQDLRKLSLPEAENLITAADGLPLRLDTRKILEAKVKDCRALAEEILSL
VPARMGRSMAECQTLAALGAVLERAKEVQLQFPELDMLKAVITRTEGWIS
EAKVAVSETPDLRKLQSLLEEANTIPVNLSDTCEEIRGKVEQAHHWVEKV
RKALPRKNKTRSNAGDAGKVDYSAARTLLSEGAGIRVDVKELDDIAGVLD
TAETWLQRVREALEESTDEAGLQSLQALLCEADDIPVEMDEHKILAAEIE
ARRWGLRVQPRLDGSQVTVKTLEKLVAEAAGLRARLPIAAQDKKAWRLPQ
EIEARRRLQGAQSWLKIFRTCVNSNGLGLRKGVTVRKVLHLLQLAGDVPV
DLSEQMRPLEEALAKAKRWLESSSEILKSCGIRSRTKFCLAEEKGDGEAD
TSVVDAASGESGQKSGQLCDNTADGRDNEELEDTGKKWDVDPNLDEDASS
SAGEEGVCIFEGAKVHQEALTECVGEASEIGVELPEAESLKALLQRVQHW
LDQLGVVCPKRTSKRRGMRLKVSVQEVRDLIDEGKAFPVDVSEEVEEITE
RLETTLKWQDEVQAELLDVAQEGLRESKAYKLKDVKDGRNGDRSDVPEVD
EDDVFNESHENRVKRLETLLEQTSDVGIDSLEDDMISRHLKAHQWASNAI
DLLEFVDPKANVTDICLAEIADVMNDGMELLYAEVADDDAACCASDCQQS
SVASKGSLSAVDGDGALNTASPSLLSYSSKAGMACDERCTSAEAGDISAP
DSDLLCAADVNSTKEGDQKGSVAAKTSTKEFEVYVTEQGEVKKRRLKQKM
KKVLIQSHGKCDEVLMEMMVFWWDKTKILRQIWETSREWSKRATRLLSSG
GEKVRLDVMEELLAETHSWDFEMELVNRVRAEVERGKNILSRATAALEGG
ETAKLELSALKSLITEGDKCKVYIEEIKALRKHLASGQRWIARCQKTRPE
ELDEMMVLAEEAKEIRVNLGEEYERVLHRIIRCCFCRQMVDGPLIRCTEC
GEKYHQRCFDIREADAVDWERRGWCCPRCLVRWHMRDALAKTMVIVSKWI
AVPNATPLGPILPHGQPMMQTALYGMGGGGVGGVLDEHYARAVELTTGKV
KAWMKRLLHAVMMCADRNAEEVRTLGTSKLVKGSVLVEVIRLAKGDLDVD
KCADVKEVIWNLSVVFWGARLICQLRRRPSLVPLQALTAEMQSVGIHNEP
LQVMLNNLIRRALEWIYKAKPILQQGWISGDQAVINVARLRELIQEKRNI
PVRLLLERRLEAMLAEEVPEKRYCHCRGFYDGLFMVQCISCNEWFHGRCV
QIRAEDLDRRTEYQCVNCSQLKSIPYPYPPYRAPDPESLLAEVDEEEEEA
ISDIILSGIGGGGGGGAEGMNLLDQDEEIFMADKGSLEGIFPCKKKLSSL
DEASNHVDMYLLPLAPSMKRKKLGMGGAAESRRHLSGGAEGVSKKKQRPS
PSSHGSKAGTGGGNGACASHTSKGNKLKAKRKGPSIDRNGRTLTGVDLDS
LGTMGDLDKNPAPSSVGGASAVSVSSQESSKAVTSSKRGRVRKPHSRLQG
DDFVFSGIAVSGSGGSGGLKKTG
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Synonyms
Publications