Naga_100002g88, gene1844 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g88
Unique Namegene1844
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:491603..498745 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g88
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:491603..498745 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL106ngnoL106Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03050NO04G03050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1931rna1931-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1931rna1931Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1931

>rna1931-protein ID=rna1931-protein|Name=rna1931|organism=Nannochloropsis gaditana|type=polypeptide|length=2217bp
MSSNVETNNIHCEWRSQNGRGVEERQTLQQKLQGWFGGQWLSRCREEVNL
DESQSISLLGVRARAAACLWGHSHWRSILGVAIFLLFVPVLVVVCVLLLD
AARLLPCLRPSSPCFRLAELRFEDICTFERMPLRLVSTAFIPHVYSRLHV
KSAMIDISLRGPKGLEHLADLSFTDADALVPMILTGGLQNLTVDSILEVT
NTTRLAYMVGYQLNEVEFQAVITTRIQVLVKTPINIDVKVPIRSNFYLTC
GHVPCKAAVCKYICQFKDYPIEDPDPENPYPYVTRVEKVKMAYDSEMQYV
ISPKVNVWLSNFKVAATFPKSTLDLYFYNATKPGSTLGLRDRQDLDEDHR
LFQMTLHEFLLQSLENSGGQPFTMNMDLRLCNTTPGQAATARDFTTRFLG
KEPMYIYLAQSQNDSTCPQLRKAMLRIPPAGLSLNTNYSTKDSSDSSISN
MGALTDVFRVNSVDLFSLNNTILRSFVNLTLMLPFALEGELPMLDMDGFA
GPNLLGHFKAFHSTLPPVPPREGHDYNKPPEHSFGKMAMSEFAPRGEDTI
LLFTEAQLSPWGVEKVEAILPNFLSQLEELDIDLIGSRPSNPGNVMQTFL
SGVVIKLASLEDRFVQHGGATGGRLFYTPLESHIKPRVHTEVRSISYEHS
NSTGLLAYVNFTYPEAFQGRFNIRGGSMHFVLADGNSTALATVTVLNFLL
SKELTHLEAEVFISDNTQAKAVHDLIDSYTKHLPLSIKVLNGFIDTAPNL
KERVPIPHADLKEQCASDIETYCPGLSLFDTRTCLNRAMGSRILTYKCTK
ALLPRGALELGIADLAKFVNLGRGLATGVLDRITSTASKVAVNQVEILSL
GTPEAPMDLQIILEEDNFATGMPDGTPVDVTARANMTLGIFEIVDLTFVV
PPLAVEVLAPLHEKQNVRNVSSPLTVNQTGALYEARPKSIIYSAGDVVDD
DLRSLFTLAMPAMEKDKTSSSMLLINPAIRISNIYDAMFWLEDIMSDLTD
KYVVARPVSTGDVWSYMMSPIQIKVDVLTAINSTSSQSTGHPGEARSPTS
LLKQPVNDTWSRIVFRSASFLDVIVTETQLVFSEPWSEAVDVSIPPTRLA
VYASYVKEGDRHFAPILTDDAPCQKDTRACPLGVFKAGAFRTTRGAMVVL
DTNLNMTSDDDGRFWGHLLSDYVAGARVALHLKTENGAKSDGEALFDVDA
SFILPKMPPLNFPLTDLVNPVGEAKQHAQQDAGRKLSLAEIWTSLDPFIL
SVMQPVSVKIETVQLQNFYSNPIDPLDLASTTLGADLVACSTVTIPGILQ
VALSIPPLSMHIYNGNITENLISLKNEEGERTPMPSPWASARLSEFVYDS
KLGNSSAVDLHVDVLRVKQALQLAEDMLLRGENVTMTISGTVDPSASLFS
RIVSHMSIQVDIYSDEPVVLDIDEQGAEEMSPPVKPSLFEKKATKLTERV
FASARVASTPSELLMDADIVIPQQGNPLVMTLLAGAIDLRLILERVPEAT
EPLARISFDPFFLSQERDMQVKMRVAMDMSCVRTLHVLLERLRARKTTEV
MLEGIVNNTAPGRFKTSVILTPALTTKLGLFPDDTATFVKVLLDELLRNP
MTPFRMDSVAIVGGADGVGSPVSLPCLLKGWCDGDTNLVEEGREIVSTRI
QALVSATIKDLSTFLGLPEGFFGLSIEVPGADFSIFAESISDELGSIIFQ
PTKLALRDGAAMSFTGVAEINDFYGLQKTVFNLWQRNFTLRLMGGANGRN
DVLAAVLRLLPISVEFTAPLPGTEGYIDTLRTLPTVCDDSWRIINTTALN
FTALVDLPHLTSPVPLRMDDFVATVYYRDVPIMQARPEGGTFLLGTDKSS
DHLYVTSLAAPGGAAFNACHYSSTPELCLLGEALGKILTFGDSGTFKGDI
LVAYRNPVNAKLTQTIRMPIQLYASERDGNPDEADIVPERVDRSPKPRMP
WGKGHLSCSEARELVQDIYINLEDTISSSLRFWETVQLAMKVFMVNIFAF
PLEIFHLQLTFFFRDLDGVGDTWPSMKSYPPSYDYCLLYKAELSTPDFVV
APGKGAWTPLLKPRMDETKLTESLTRLFDEVVGHKRLCADILDSVVSIKL
RSTLGANDVPFSINLPMSIRSISLYGSNACDVKHASMAHMQDPNAKQVGH
MGTGDKANKYHEKNTESGGVTFVNADGSIVRANVQALNNAGGEYTMKEDI
NSRVRYYNWMNEDLDVK
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Synonyms
Publications