Naga_100013g27, gene181 (gene) Nannochloropsis gaditana

Overview
NameNaga_100013g27
Unique Namegene181
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:495257..499871 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100013g27
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:495257..499871 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL002ngnoL002Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G01750NO02G01750Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna190rna190-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna190rna190Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna190

>rna190-protein ID=rna190-protein|Name=rna190|organism=Nannochloropsis gaditana|type=polypeptide|length=1291bp
MTDEEENDAVSNDKPRNSLPSDSIRVAPDVPGVSPLKHSHQSLLHDTGIG
DQWVEYNRNLGSNCDFRTSTTSKRPFLEPLNDISTSPSRHTYGEASPSSA
SVRTPRKDNMGIYLTRVATGLRSTVKHAFRWRKRPPGPRDVRPSVRAFYY
KLLNASRPALACFLATGVSMVYPWSHKVTWFSITLSISGVGRNLGHTLAG
IRQQWMGITVAVPLCFLLKFLEFSKVLTAIAIFLVSVAVCGSDMLNEAAK
QVSLIFITWVVLVALVTPDTTMEDLLLDLIKAVLGANIFCTVVMLFPSPR
LAVRLCRWRLEELQEVLGRFLEDAVDSYCLQDDSGLHDLEAVIDEAVSLI
ETIRALLPDVDFELALLSCGCQRSASRRTYDHVVEYLGILEDQLENCRGM
AVALSDMYPNATHSEFVRAMRPGLLDVVTESKKVLEGTCYHLSAALQYWI
QQKWWWRLCYRGRGPWRPPKTQSFVGRECATRSAQSSRGDGKHKHVSIHM
EDAGKPQHGGLFSRRPNSSLYSEGGDHEQARAPNCAAEENTTMSLSGPIS
EQEREHLSRAPPSFYDIDPQCEDVEDCVPGELFSPPKAALARVLHALLKT
RMRVVYGVELKGTAPDDRIEPVHELPSKMRQDDLRVLSIDRLAMRSPRSV
VLERSRTAAVAAASFQKDSERRGYMNLLPRNAFVLDLKMFVAAFERHRIL
CNVSMVAVEPSATSTREQKTCCSLATSVFVNAYRNICRGPGEGWDAWRQP
LKVALAILLASIVVLADDKHLGLQTIWCPITVAQTMSSHPSSAFKSGANR
VQGTVLGAVMGMAVTTWAPVVNKVAIVFILTAWVFVCAFSRGSRTYGEAA
TSAGLTAPIIVIGPVVGSSGAVVRISQVILGTVIYVGVDNLIFPTRAKIL
LRSQLCESVEKLGNLCRDGLAIFQTEIALGSRNKDEQNENRGDTVEQHNA
SPARNKIVGTFDDGGSTGIVTEADEEPQTSLTFKNDETPEFTILEKVKRS
ALFRFVGWGKGKNGKKIHKTPKPVKMTETHTSPPTPAVETSAHLMAVVQA
AEARMRRNTVIIQQALSKEELYISYASDEPELWHKPFQRMAYLKVYAIQL
RMHKYLLMLHRSAASFPRTLARCDLEMLQAYGSIILRLQRTLEAVFNDVL
LRLRRLAKKSSSTGASAQSMENLSSPIMKQGGVNVFRLRQEFCDIQDAID
DLVADYFAKDPVLTSLDFIVPLNGMIYSTRKMSPECVAFVQAVRELKFQE
KRIGRGVPMAAAVMKEMALPVFGTEKIGNEREGEKTKEQMD
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Synonyms
Publications