Naga_100002g147, gene1793 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g147
Unique Namegene1793
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:351061..356285 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g147
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:351061..356285 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009987cellular process
GO:0005975carbohydrate metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1877rna1877-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1877rna1877Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1877

>rna1877-protein ID=rna1877-protein|Name=rna1877|organism=Nannochloropsis gaditana|type=polypeptide|length=1230bp
MALQARLLTRSLRGFGNGRLPFTSPRCNPRVWHHASLSSFTRGGPPSPHP
LGVLSTRLPRVRHPQRSLSSPAPTSEDPPFKKLMAANRGEIATRIMRATT
ELGMASVGIFSKEDRFTQHRYKADQAFLVGADKSPVGAYLDINSIIQTAK
RNGVDAIHPGYGLLSENPNFARACAENGIVFVGPTVEQLITFGDKTKARE
LAIKAGVPVVPGTDGPVSTYEEARSFIEGMDVGYPVIIKAAHGGGGRGMR
VVRSAEELEENFKRASSEALSAFGNGEVFIEHYVDQPRHIEVQILGDGRG
NVVHLYDRDCSVQRRHQKVVEMAPAEGLPEATRQALFQDSLRLTGAAKYL
CAGTVEFLVDKQGRHFFIEVNPRVQVEHTVTEEVTGIDVVQSQIRLAAGA
SLEELGLVQEKIKTYGYAMQCRVTTEDPSRDFQPDSGHIEVFRAPGGMGI
RIDDGPGFVGANITPYYDSLLIKITSKAANRHDAIMKLQRALKEFRVRGV
HTNKSFVLNLLSHPDFIHGQVDTGFIARNPALLQPVWSSNRGQKLLKFIG
NVIVNGPEPSLGATGPPCSPIDPIVPTLSPLPPRKEKSLRQIYLERGPKG
FAQAVRKHKGTLITDTTWRDAHQSLLATRVRTRDLLRIAEATGIALAPAY
SLENWGGATFDVSMRFLREDPWDRLGAMREAVPDIPFQMLLRGANAVGYT
SYPDNVVFKFCELAQKHGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEA
AICYTGDITDPHRKPYTLDYYLEFARQLVGLGVHVLAVKDMAGLLKPEAA
SLLVGSLRKEFPDVPLHLHTHDSAGTGVASMIAGAKAGADAVDAAMDALS
GTTSQPSLGAIVGALRHTPYDTGMDMKAINAVNEYWEECRGLYAPFESGQ
KSGSSDVYDHEMPGGQLTNLMFQSTQLGLAGQWGQIKKAYAAANRLLGDI
IKVTPSSKVVGDLAQFMVQNKLTEEDVRKRAEELSFPSSVIEYFQGYLGI
PPFGFPEPLRTHVLKGRTLPNGKACFEGRPGAELPPFAFEDEKQGLLDLY
GKHIRDVDVMTHAQYPQVFSKYQSFFKEYDDVSVLDTRTFLQGMKLGAEV
SVELEHGKTLFVKLNSVGQVDATGHRDVIFELNGQQRVIKTKDTKANVNV
KVRPKADLGKPGSVGAPMPGLVVEVKVKVGQAVKKGQPLLVLSAMKMETV
LTSPAAGTVKTLLVGAGDNIAGGDLVVEIE
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Synonyms
Publications