Naga_100002g172, gene1774 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g172
Unique Namegene1774
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:294639..300481 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g172
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:294639..300481 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0009056catabolic process
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04420NO04G04420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1852rna1852-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1851rna1851-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1852rna1852Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1851rna1851Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1852

>rna1852-protein ID=rna1852-protein|Name=rna1852|organism=Nannochloropsis gaditana|type=polypeptide|length=769bp
MEAFHRRGMKTALALARSKSAIPSSMVAPQQRQFFAAAYNLAKKVTPKIS
ATEAAALEAGTVGFDRDLFAGSPSLEGLKNKYDLKISAEERAFLENEVEK
LCEMSNEYEMYKNKDLPQPVWDYIRKNGFLGMIIDKKYGGKGFSAHGHAL
VVQKLSTRSQSVGVSVMVPNSLGPGELLKRYGTEAEKDYYLPKLATGELI
PCFGLTGPASGSDAAAMRDQAIVVEENGQLGVRATFKKRYITLAPVAGCV
GLAVQLKDPNGLLKGKGKEGISIFLLERDLPGLRMGPRHDPLSAFFMNGT
VEGENVFIPIDKLLGGQERAGYGWNMLMDCLAEGRAISLPAGAIAIGKLS
VTAVGAYARIRKQFKVPIAELEGVQEHLARIAGHTYVITAAQSLTNSMLN
QHEQPAVISAIMKQQCTSRGRQIVNDAMDVLGGAGICMGPNNFMGANYMA
TPIAITVEGANTLTRSLIQFGQGLMRAHPHLLSVVQAVQKGDDLQGFNKG
LAGMFSHGAVNATRSFSKAFIRSRSKSNFEGYYESQLGRLAAAFAIASDL
SLTMGGKIKFAESLSGRYADVLSNLYLGYATLWFHSKYPAQGSEAVAAWA
LDNILVDIQDAFYGIAENYPIRPVGWAIHALTFPTGKTYVRPSDKLTTQV
AQLISKPSGVRDLLSQDIYVHKDLNDRVALLNATLPKAVKVDEIYTKLRK
EKRTATAEEQKLIDEVEAAREIIIQVDSFPSLGQESVTKGWKTEDRPALQ
DIYGVKKGKNGNAAEQLAA
back to top

protein sequence of rna1851

>rna1851-protein ID=rna1851-protein|Name=rna1851|organism=Nannochloropsis gaditana|type=polypeptide|length=769bp
MEAFHRRGMKTALALARSKSAIPSSMVAPQQRQFFAAAYNLAKKVTPKIS
ATEAAALEAGTVGFDRDLFAGSPSLEGLKNKYDLKISAEERAFLENEVEK
LCEMSNEYEMYKNKDLPQPVWDYIRKNGFLGMIIDKKYGGKGFSAHGHAL
VVQKLSTRSQSVGVSVMVPNSLGPGELLKRYGTEAEKDYYLPKLATGELI
PCFGLTGPASGSDAAAMRDQAIVVEENGQLGVRATFKKRYITLAPVAGCV
GLAVQLKDPNGLLKGKGKEGISIFLLERDLPGLRMGPRHDPLSAFFMNGT
VEGENVFIPIDKLLGGQERAGYGWNMLMDCLAEGRAISLPAGAIAIGKLS
VTAVGAYARIRKQFKVPIAELEGVQEHLARIAGHTYVITAAQSLTNSMLN
QHEQPAVISAIMKQQCTSRGRQIVNDAMDVLGGAGICMGPNNFMGANYMA
TPIAITVEGANTLTRSLIQFGQGLMRAHPHLLSVVQAVQKGDDLQGFNKG
LAGMFSHGAVNATRSFSKAFIRSRSKSNFEGYYESQLGRLAAAFAIASDL
SLTMGGKIKFAESLSGRYADVLSNLYLGYATLWFHSKYPAQGSEAVAAWA
LDNILVDIQDAFYGIAENYPIRPVGWAIHALTFPTGKTYVRPSDKLTTQV
AQLISKPSGVRDLLSQDIYVHKDLNDRVALLNATLPKAVKVDEIYTKLRK
EKRTATAEEQKLIDEVEAAREIIIQVDSFPSLGQESVTKGWKTEDRPALQ
DIYGVKKGKNGNAAEQLAA
back to top
Synonyms
Publications