Naga_100095g6, gene1727 (gene) Nannochloropsis gaditana

Overview
NameNaga_100095g6
Unique Namegene1727
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:172851..177089 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100095g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:172851..177089 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04860NO04G04860Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1798rna1798-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1798rna1798Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1798

>rna1798-protein ID=rna1798-protein|Name=rna1798|organism=Nannochloropsis gaditana|type=polypeptide|length=698bp
MADETQLMPSQRRGWLRNVFAPVTLVTSLVAVAVAVYFVLGSKSLIYRRP
GSSSSLESGKTSMQCKVYQDPADPTSTINMPSKEVFASNLTQFPSGFAWG
AATSAYQIEGAWDEDGRGLSIWDTFSHTKGKVENNENGDVACDHYHLYKE
DVAVMKALGITNYRFSISWPRILPSGTGNVNFKGLEFYSDLVDELLANGI
EPYATLYHWDLPQALQDKHDGWYSPVTSDAFAEYADVVFDALGDRVKYWI
TLNEPWCSALLGYGIGVHAPGIKDIKSGAYLAGHHLLLAHSKAVKLYREK
YQVLQGGKIGITINSDFKQYYCDNTLDKAAAERSQIFVMGWFADPVFLGD
YPEEMRKTCGDRLPSFTEEEKADLKGSLDFLGLNHYTTALVASPLFRTNG
GNYYTDMGTMDSSDKSWPVGESGWLKDVPWGLRKLLVWIQNRYDDPLIYI
TENGVSGPGESSVKKDSEGLDDTFRQSFMQGYIGELYKAIAYDKVQVGGY
FYWSLMDNFEWADGFRPRFGLVRVNFTSQARFPKESSFMYQEMMARVTPP
PPEPEPVVPTVPAVPAAAEGTGPVPVAGEDPGGMAGGGEAAADSEDAVGV
DGDVSIEEGAAGDGAAIGAGESPATEERGSGLDPLASIPPEAPEDGLPST
DAAVAAASEAKLQVKEGGNPQEEEEAGREAVVEALPETREADAWNRNL
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Synonyms
Publications