Naga_100269g3, gene1722 (gene) Nannochloropsis gaditana

Overview
NameNaga_100269g3
Unique Namegene1722
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:137545..142344 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100269g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:137545..142344 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04930NO04G04930Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1793rna1793-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1793rna1793Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1793

>rna1793-protein ID=rna1793-protein|Name=rna1793|organism=Nannochloropsis gaditana|type=polypeptide|length=1349bp
MRFRLGEKALPPTTGTLLRMQHKVLRPLLAPAFCSIFCTIVFPLVLAQQP
SYADSRTKLPSGARTAPEASPAVASPPFLTPSTTAAPGFQVFRKFLPPNT
STWRDGRLSGQIEEAWMPFRPLPPLALRTTRDTTWQFLPQDSSKSVLFVP
VEHSLKFFRTFRWEETFTGLSPWSSRPDLEMVFVPMTESTDAAALVREAE
TALAAIPRDAEFWLPRMHFSLDTVDSLREKHSWFADCVDAWSMPATTVGV
LWNPSERAGQAETATSLSLFDATPPISGLATPGPGVLGGCGDEIAGGTCG
HLAFFGSACLVQGGAGLAVPPLPVQDVEGKVALVARGGCSFAEKVRVVKG
AGAIAAIIYSDEHPRTAWLATEEEGGEAKVPSMITPESFPLALIDQAPGQ
WLRDTLVDSQGGRNMSVALFERTSAPWAFAADGTGHFRRLVRGDASLAAA
ILEATKFEYEALVAKSNPPAAELGLGATTVTVPVMKGEQTVGEKATRMLA
KEVEIPSYVTERPNSGLHLRVHLMCPARAEENCPSLSSFVKLYACEASGG
TGPSHRRVLDGAPGSEEENGARGRLALRPEGFAPDVGKAQDVAPPPIDTS
GGDGNVGHVRASSLPTSPSPSASRPPFPTAVAATPSSPTSLRTPPKGTSP
LKATPTGLGGSHGKGQDARVWEGCAGEVVELGRLVAPAGREMLTVVEASP
FLAALPLKGDYRRGGKSEEYSPHRPVVKVFVLGADGYNVSLSLLFTAASP
GDLVPFQTFRIDTSDPGTTQTRQGDSQSTAASNSNFKIVSLPKGVPSYSL
VASITAEGIPPGSDLPSAAHTFQVQELAPSLTSSSPPPSPLTWDVPLLLQ
SQPFGCSNLTLTRAGVIPNQLGDWYSSQPGFCPGSSVALKQFAVTRPTAP
EEGEIKVVYLQGRESPRQGRGDGEALSASGGEGLVDLEAYVVTYAFLPPT
PQVSSVHFVNVSTPFPPSTDPPLPPKASSPTLNEASVSSQAGRTTLTLRL
PGPSFADSQDAHILFPSPTADTSQIRMPIDLYRVTLSERVSGDTFVYTFP
VAAPPDLGVTSEGEVPVSVAPPNSQAVQVEVANTTAAIPTLPTEVEGGKD
VEERGGARGLQGGRRRLPVGSQTEGQGASSAPPPSLPPPPPIGPAKSPTS
HRLLGQNRPRLSRGAGAGGCPDGERAWKLDLCPFRGLARRQPGQGTGRPR
REGRWAVARHHDRLGHGPTGGGGFDRSAGRRCVEACFPRALCRHGKLRGR
GRGGQQWGRFGTGGRSIGTEARPRKQERGRGISRGQFATGGRDRGKEGGR
EAFSTSIGQARKSVPVEQWAWGRGWREEGGKGGKEGGNKGGGRGRAPDI
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Synonyms
Publications