Naga_100071g4, gene1572 (gene) Nannochloropsis gaditana

Overview
NameNaga_100071g4
Unique Namegene1572
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1111884..1120073 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100071g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1111884..1120073 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01170NO01G01170Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1635rna1635-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1635rna1635Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1635

>rna1635-protein ID=rna1635-protein|Name=rna1635|organism=Nannochloropsis gaditana|type=polypeptide|length=2579bp
MTDFLGSGRVLSLKSAIHRGRLVFIARRRTAARGRLSLKVLTSKSSRNHG
ATVASRAGRHGWREQRESGHTTQAQHECGKRQRSCGGAQSSICLPLNARH
PRANGEAALQDSRKKRRLDIVQYKESVLAKIVAAKRLKAAELASAREAGD
VSGASVAGPHKAVSAGGGSGSAKTATSDEATGAVSASKPSGSSAGGVPEK
DVVRTASNETAGGSDDDTPPLFLEGRNLGTASGKSQQVMASTTGAVPGAL
PDSALPPTPSRKSAPPTTNATSAPLHAPASSPSPQQRPHQPAQAPKTQDS
QVPLAPPPPSPQKTNTGDAVSPTRPSLATVRPPSTQSVGPPLLLTMASLP
VGQAVVPSAVQNLNQAAMAHMISTQQLVLHPNGTLAVGPGLAIAQQRYLK
AQQQQEEATAAKANAAAAVAVGSGRPSAGGPPQGGAPTPTSGAQRKAEAT
AQPETTKAAMSPGQASPSKSQSAAPPPSSGSAKQPGRDQTGIPPAQGLTP
RQQQQQQQQSPQKQLQPQQQQIQQPPHVPAPTSRSAPQPGLQPPQLPPPS
PPGQPAHQPPPLPPQESSKKTSQVKREVEAGSTAKSASESQSSSQPSPTA
PTVSQLHSAPATTKLPQGHGGPMHGDAKEATFPNATASSVESGNSTAPTL
TSPPGSVPVESKPSSTGTTTTQSTPSGPPSPPPPRPKARVERVSYVPPPR
PAYARVLGGMHERPGLLSKVDSYVVKVSSAPSDAEIEPLLLRRQALLQAL
KGRKGDSGVVGKPALLPAPRRKTHWDYLLEEMAWMATDFHEERKWKQAAA
GLLSRAAASEARRRVARERGVGEETSRICHRLSTGVMGFWRAASAQIRYY
NDSRSVLQQEQEAALAAEAGDGEGEEEEEEEEEEEEEEEVDSMETNESEA
QKAAKAARKAAAREDKAAANEVANPVEMTEAEVVRMREAVKQCVNSAQEI
AKLEHMKIKGASPEEPQPQPPGAGPPLLLHQLAALSWLQQLGEKKLGAIL
AEAPGMGKTVVVIRAMQALADGAKIDKDDDGKAACLPQLLVVPAWSIVRW
RAEMKVHGKDLSVMLLEEWGAAMRLARSSSAAKREKIDVVLCSSAALGSS
DAQRLSEHAWSNFVVDLREQSYVDTETGTFCSETGISASAPGDPNTSKHR
KSGAEEVEEGEDEAGKVVRPSEDAAMEGAEETNDTSTDDESQDGEDDKEQ
AAPAVTEWQRVAKLASQVMKKADRFVLLTREGVSKEEDALPLSAAWLSLV
LPHIFSSAASVLTWAPRAAASLANETAAAQAAAAASNGTQAPSSKPEPPA
PWEYVGRIVRGFQLQWVGNRADILKEESLEVAVVSCPMPSLQEKEYQRIL
SATIGSAGARASGTRSGSGGGSGNSMAVKGGGDGKEVANRLLAMRFACLH
ADLAYWYRGASGREQALVSQYLPLGALSVSVPGSQSKADVGRSIKGDPSS
RSLSNGEAGVHSAWDDVGLFSQHNSVLNCTEKSGKLAMLLKLLRQFDGQG
KKVVLLAGLPQSSVLVHTYLTAADVPHEYCPLSEVSSPASLSGIPFWLRT
QLTIARFNLSTTTLQATTRVLVAPIQTCVEQGGLVPSAADVVIVMDDEWS
TGRRQKSRQLVERIAMRAKPLKVFRLVTQGTLEEELWPNSLPSSSTSSIS
GGFAGTLTRTPEHLRLLQGLRLSDVELGMGKEAEELFGARERHLFTDQES
QTEAIKGDVKENWARGGTEGKGDMARGVMGELSKECFTGKSVGAYGKRLL
HRVAAMTEGEQSGPAPRGASPTEGLSLMMMEEAGNFAASHGVIHDAMRTL
VFEVSAGASNAQTLLGHYTAMRALGVEMDMAIAAPPIPPSDPTLTELVEF
PSWMEDPVAYDLGLVIKYVSLVETISAQQRRKKLMEARRALPPSHRPGEA
GEVPLGPDGRPLGAPGVVRIPGQGRPRIEMPTDWSAEEDVELLWAYETYG
RNPLVIPFVLNKKTPPYVKKRSSKQCLDRIDALLNQGVHQAGPRLPRPVH
PLPSFRGRVLSTQGPNFDDLWTPPIASWRKSPRQQLQGALAEPVLPAVVL
AGPDHDASLRLSRSFFELSKAQSRLRQSTPLPENSDQLPPAPGPVTTPAN
MPLKPPHSALHILEQIRKAAAASAAAATSGHSVPGGPRPPGGVPGQHLQQ
QVAGAGGTNAPSLPPSSTVNVALLNTSLAPVAGLSALGPGSGFGLGEGRG
AIGGGPAGGRHVKGGRKRGEVGYAHLSTGGVGGGGGGASTAAQKLKARRV
GAVPGGGQGHPRAGMGSVSNTTFAGGSSVGHVSGALMGGQLQQQMQAQQQ
PHQQATGVGGNMMAKASTVTLPAHVMQQQQQQQQQQQQHSQHPQQHPHQP
PQQLSQSGAMTGTVAGGNRRVPSGRPGAGGGTQAANQVYMNQLMNLIQRR
PDLKSHITQILSRQDLNDGQRIEYIGEILKAANLAPQGSSVGSVGVAGMV
PAQQQLQQQQLQQQQNRLQQMQQQSQQQPQQVPASLQQQRPASQANANPA
APPPARSVPPPPSTAPSSTAPSPPPAPSSQGRKVRRERGVCQHALRSEAS
NWGRHIDGFLRWNTCGCSCVLLTQCATRI
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Synonyms
Publications