Naga_100024g24, gene1548 (gene) Nannochloropsis gaditana

Overview
NameNaga_100024g24
Unique Namegene1548
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1053719..1058497 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100024g24
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1053719..1058497 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0005975carbohydrate metabolic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01420NO01G01420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1611rna1611-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1611rna1611Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1611

>rna1611-protein ID=rna1611-protein|Name=rna1611|organism=Nannochloropsis gaditana|type=polypeptide|length=1090bp
MSAKAIREYYGKQLIARWLPEYSNGRHTTDKKQVLITPDVLEPTKGQSFE
VIAQANPWLLKEKLVVKPDQLIKRRGKAGLLAVNKTWEEVQAWILERMQR
EVQVEQVKGVLNHFIVEAFVPHSQDEEYYFCIVSNREGEEILFTHEGGVD
IGDVDAKALRIQVPLQEEPNPEAIKAALLVHVPAAKQDFLATFLEGILKL
YRALNFAYMEVNPLVVTGDGRVVPLDLAAKIDETASFLCGPQWGHVDFPA
PFGRREFPEEAYIRELDSKTGASLKLTVLNPSGRVWTMVAGGGASVVYAD
SIADLGQGHELANYGEYSGAPNEQQTFDYARTILSLMTRMQDPRGKVLII
GGGIANFTDVAATFKGIITALRAFQEELREHNITIWVRRAGPNYQEGLRI
MRELGQEIRVPIKVYGPETHVTAIVPLALGLEDPKNYPEFDETSGISTVP
KPAQSLPNDPADLAPPDAVEPEVTIPSKHRIIPFSPETRCIVYGLQQRAV
QGMLDFDFLCKRKKPSVAAMIFPFSGNHYIKFYWGTEETLIPVYQTTEEA
IRRNKDANVVVNFASFRSVHETTMEILRFSDQIKTVAIIAEGVPESQTRD
INLVAQGKGVGIIGPATVGGIKPGCFRIGNTGGMLDNIVASKLYRPGSVA
YVSKSGGMSNELNNIISRNSDGVYEGVAIGGDRYPGTSFIDMLLRYNDDP
DVKMMVLLGEVGGTDEYAVCEALKSKRITKPLVAWCIGTCASIFPYEVQF
GHAGACARGMGETAAEKNAALREAGALVPPTFDKFGEAVREIYDKLVKSR
VIVPRAEPEVPKVPLDYTWAKKLGLVRKPANFISSISDDRGDELRYAGMK
ISEIFEEDLGLGGVVGLLWFRRRLPAYATKFIEMVLMVTADHGPAVSGAH
NAIVTARAGKDLVSSLASGLLTIGPRFGGALDDAAQMFTNAHDSGMEPAE
FVKVCKNENKLIMGIGHRIKSLANPDARVVLVKEYAKKHFKNTEVLDFAL
GVEQITTKKRETLILNVDGCIAVCFVDMLRSCGAFTREEAGELIENGCLN
GLFVLGRSIGFIGHYLDQRRLKQPLYRHPWDDITYMQEFA
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Synonyms
Publications