Naga_100024g51, gene1524 (gene) Nannochloropsis gaditana

Overview
NameNaga_100024g51
Unique Namegene1524
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:997038..1001267 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100024g51
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:997038..1001267 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01660NO01G01660Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1585rna1585-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1585rna1585Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1585

>rna1585-protein ID=rna1585-protein|Name=rna1585|organism=Nannochloropsis gaditana|type=polypeptide|length=1021bp
MTSGVGSGDSPLAPPDASHPSAWSSLAATPTSCPKNIREDAERAESANMA
KTPNDNFVWQSQQQQQRRQYEESQQHLEQQQQQEILEAPHYASDQGGVWE
DEEGMVDVEAMVTDELGGSRTSLSSMHSQEQMIHLLPEKNPSYGFKERQA
SLSCRYRRQRHKVAGDKWKTIGMGGNRESHPDLTQQHRSPSDGSLGERGG
MGGRPPLSMTHASPRNGLSREGKRQEGGSMTGAVSGSNGWRNDPPNRVHL
ATIHSLNNGPGRPPVSPFQTSPNEDKAQPCSSSVAQQTREPCHPCVEEQK
DLPLRRKASTGPPAAPPTLRSRSSSRSPAKGKRGDTGFSSSVSTSSHRSS
SCKPRRRGPHDDSMRVRASHALAALVHDINTHSRALIGKFVKAADDTFLG
VTAPAMGLFLTFAHDLPRAVHRVHFEKDLRMPMPRRKGEDTRHSLSFMFL
QPIHSGRGRKYPTVLVRNPYGRLTFFYFFYLFAQRGYNVVVQDVRGRGES
TGVFDCLHDHDDGQATLEWITSQPWYSPEHGIGLLGMSYNGFVLYSTFKD
PAIPVHPAVKAVVPINTTSRLSTMSYRDGPLHLELIIRWSGYLWTLTRDT
TSLLALLLSLGNGLMFLGYFGLFDHPRLVRALRHLPVEEITHMVTGVQLN
RFQMFLSPPGCDFVKARDASAALRPDLPPAQIHASWYDIFLIDSFFDFNT
LVAAGNRGARLMISSDYHVKRYFHYGVLVREALTHFKRYLRREPLPYTDA
AEEEERVTMQIIHAAPGLEWMGLPSWPPAASFHVPLYLSSEGGLVFGPGA
ASKGASYPGQGEECLVPGERRYTYFPSDPTPSVGGNGIGFLDAGERVQNQ
LEASRGGRDLLVYTSGVLEEDMYVIGSPRAELHVRCMSPRAKQADFVVRL
CDVSPDGTSRNVCDGVRRVDFSDVERLEAQGMEGEGGKTMSVAVEVYPTA
VRFPKGHRVRVHVASAGFIRWERNVMGYGYPSFIPVRFEVLHGGEEGGWG
GSVLHLPLVPRESLVPSRVRK
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Synonyms
Publications