Naga_100007g48, gene1471 (gene) Nannochloropsis gaditana

Overview
NameNaga_100007g48
Unique Namegene1471
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:856361..866779 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100007g48
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:856361..866779 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02200NO01G02200Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1526rna1526-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1526rna1526Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1526

>rna1526-protein ID=rna1526-protein|Name=rna1526|organism=Nannochloropsis gaditana|type=polypeptide|length=2980bp
MPLDEPIAVIGASIVLPANINSRERFFEIIREKNQVSVDTVAAGRYHASD
IDDSDSGHPWKLKSKYSMIFTEEELGSYDSHLFNIQGKVSRNMHLQQLGV
LQSAFEGLEDAGIPLHDIYRTRTGIFVAAYTAFLPACDGPDETLLRGQIM
SSLADQVSYFLGTYGPSVTLETACSSSLVAIAMAVASLQQGDCDTALVTG
LNYLNEKDFHLSLQACGVMVQGPTSHPFDEDGAKGYIRGEGMGTVVLRRM
ADAEKHGDRILCKVLRAIAASAGPADNALEGPGRVYEQPCPYGMREMFSR
VYKCANVPLGKLHYMECHATGTAVGDVIELQAIGDVFGDSHELRKNPLRI
ASVKSNIGHAEVAAGIFSVIKIVQMMKHRTFLPSAGVTCPRKDFEWVKHN
MVIQQECEPFPDNEPVTVGVNSFGIGGAYGHVVMQEYTGPEPVRRALLTS
ASSLWALPVEDAAAKGLVFPLSAVSMPHLQLFADRMAKYIKERGPTISLK
DLCATMWIHRSRFQYRKSFVASTTQELAEKLAAFASSGNTEPSGEGRKMQ
VAYVFTGQGSQWPGVGKTLMAFPVYRKAVKAADKLFKSKSGWSILEKIDT
LSADEMRDTLYAQPISFLVQVGLYELLKFFKVFPDVVVGHSAGEVAAAYA
SGLLTLEEACEVVYHRSAEQQKMAGCGRLMAVGLSEEKIQDIIRGMADVE
IACVNSPESVVLASSEERLKEVGELLPEGTQKAMVPGNIAFHSSRVEPIL
PAMKARLAFLDKRPKTWGLPYVSAVTGKLESKLDSDYWVDNVRRPVLFQK
AIETIFSQDTGPDIVIEIGPHKTLCSPIAQVLSAMGKSAAILCPLKRNDT
CSMRFLEALGQMFEKGLSVDCKQWYQDLGYAFDEDLPKHPFIKRRLHELH
PVLKNDMRNGLYIDGPVAGVQKFFDGAYVSEVSDRTYKQMCDHKMGGQAI
FPGMFFVEMVLEAVKGAPITLTNVEFKSMLKIPSASSGENPSLIALNFAE
EQDGIRSFVVRSCPTREKWDEEPVLVEHCTGKVVKADLLNEDGSIKDGFK
PEAYGLLAGLELKDIGDGGLKDLIGRHTQCEHSSTENFYGTHCVEGQMEY
LESFQLVESVHVDPKTMSILGKLNYDNEAWEKKGGIFGVQLLDALLHQTL
ILATHSAIYYAGGFDACHFLRQPATKELYVYFTLDKYRLQIGRKKKVGDF
ALYDGTGRLILYMQGFYTVFASFSDNYKLCDLLWQPFAAPMPPPANELIA
YSEEALAHTADWTSSDNSCMTAWLVERLRSNGALELPPPVGDAHANKSRK
VKEVVPLVRKVLEALEARLSEVHDSAITDKVPAIPKVANLHERPEELVKT
LTLKIQEKKVPAAEEGGADLVELTADEIKELVATSVQRSAETATVAAALK
AQMEAQLRLLGHNCVFRVFEITQEATETVVEALSRLELPAHIIVEYFVGS
HNSGLLKSLATKINRRATNIRLRRVLINDMLFNEIKDITFEAVVFDEWTR
SGAAAYAEGRFESPAANALEALRTFMMPGAPVFVRGLYDLPLWVPLISLA
SASQLPLINTLSAEEAVADWTQQLLAHGKVYSTEVGATCVLIGEQGPALP
RAPSRYLLFVDKQSHGEEFGRLLRLDHALAEAEVVLVGESGQLTDESTAD
DYAALLAKVLAPQTGEELPEGDDIAHEEEEIPNGTPFKGVIFFAGLHDTS
VIGDVAFSRLLKLAQGLLKNGDLLKTLRGSELAEPNSLWVITKGAYVGDV
CPAQGTVQGLATVLCGELPDMVTKHVDLASSNSKDMRCLSKLVVEDSREK
SYTVMNGAAQVARFNAMDKTNARAMQVLATDPKLSYFADITSAASVPGEI
NVTYQLRDVPPPKENEVQIDICAAALNFRDVMIALSLLPEKSYERSYYGR
NLGLEASGVVSAIGRDVKDLKVGDRVMTGEPRCFANRLNAPASRVVKLDQ
RVPFEDAASLQSVYNTSHHALINLARIRKGETVLIHSAAGGIGHAAISIA
KHVGAVIHATAGTDEKRQLVKDMGVEFVYNSRNVGWFDDLMRDTNGQGVD
VVLNSLAGKHQRLGVQALRSSGRFLEIGKMDIFDNNGLPLLAFRKNISFF
AIDMDRLALDDPAQTAEIGREVGMHFMEGHYDKLPIVTFPMNEIKEALEF
MKTGKHVGKVVLTNYLEDKKTGKVSPCSVTVEKPQNIFHADATYLVTGGA
GGFGSKLVRYAYYNGARSFLITTRSADTEKVRGLFRDILDDASVKMEVMT
VDTGSEADMKKLTDRAHGISPPVKSIFHVAGVSVDIVLPEMKPENFYEVA
NCKALGAWHLHKGTLDLPIENFVVVSSIASLIGGLGMSSYASSNAYLDAL
MRARRSQGLPGAAFNMSSLSDVGILANNLSARKFQLKMGVEYITSFRALQ
ELEMGLVAGMNPIITMFFKEKTRTMFPFQSPWSYHLGEALTLGAVAAKGD
FMTTKEIAHFLSEEIKEITGASEVLVTSQLVTLGLDSFGFVELGGRIKKH
FGIEVSSVKMSPDNTLEDVSKIIYKLQSRGSNDKKGGETADENDNHEEMM
VLHNKAEMNSMLATLFEEDDDAANNHKAFHLRPLTSSAKLLFGATGLTGS
HLLRYMIKAGVPKVFCIVRGSTSEGGLARIEKTMRLLKIWKPSFAANIVV
IPGDMALTNFGIKPDMYARLVHEVDAVMHAGGSRKWHMDTESVACNISGL
MNIITLARKNNASVHYVSSGWLDAEEAATESDRAILRGMPYVQIKRRAED
ILHFAARHYKLACFAYRIPLISVNTKCGFTGDFVAFSVMQTLYESRMMPK
DMCESSCYPIMPADLAAKYVVRQMSRAPRKTNGKALLYSASAFSEIVSTE
KLAEWVEELKNVKISRTATMEQVKEHYAKRLVNEVQDMQASFTDFLVALG
RASERLRLQVRRESSLRFLVDKALYFNTKVPPSELLRDYIKNHPEVLLME
QAWFVDGEEDEGRDAEEGPGKDHPAEKDVA
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Synonyms
Publications