Naga_100007g56, gene1464 (gene) Nannochloropsis gaditana

Overview
NameNaga_100007g56
Unique Namegene1464
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:831081..835948 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100007g56
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:831081..835948 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02270NO01G02270Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1519rna1519-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1519rna1519Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1519

>rna1519-protein ID=rna1519-protein|Name=rna1519|organism=Nannochloropsis gaditana|type=polypeptide|length=1398bp
MLWAAMCWGWAFVKDLPYTSWRLLCTYPRTISVIAVGFTVIAVVLGQRLL
EKLEQPPSRTTSRSLPSPLIQRHSMGGSGSEYDEVANRAYGDELLQDRKL
RHRYRKLKQNWLHHGQNLFRKIRRRGRGATSRDRWSRRLEDGLESIYSPM
ELPVPSKLSRDVSSGIVLDGVRLNGASHLAFMAIMDSWKVFGGRDVPLLL
KMCTGVTTLSLQAGDCLFEEGKPLEPCLYILDEGELEILVRSDVTAQEAS
ARGHKREAPPPPPTDFLERIDKRGTIISGILDFVALLTESAVAESCATAL
CTKDCRVLQVPIVPVGSEARLRSPSLSGIEEEDRDTPRNPASAHARSRLI
RSCLVRSYRVTFATVYAYLGVIYDLYPRYPVFPVVGSALTSLTPETSLGE
KHQHALKRLIRLILALDPDYEIPDLDRCSAFFASSPTAGGNGTAPGGPVG
ATGTDPRLYRRASGAASPRTLRDNGSRGPSSSHLPRLYVLREGESPHELD
DQSRTSLHILVTGRLQVSKLDARLSSVDSSQARGFDQSTSLGIGRSIFSS
QYGAAAMGTAPPLVNPLGSPDAGAAAAAAAAVRGEHGPGAVLGYSCLLTG
APEDWYSPRGKNRARLRLEASCDSLVVQIPLTFVEHAMKPNMLATLALAA
RKTLETIPRVLRVIDFGVKWKQLQAGEVLVREGQSSDGCLYVLLYGRARS
SIQQNVSAPSSPSHNRSSEGRGLESPHKGGDLDLSASLREHREENENVVV
VADHGRGTLIGETEILTGGAHKTTVQAVRYTSFATIPSSVLSFLIRRHPR
VLAHLAEHVVDKAAFNSRHHLPLYRGRTPMRMFTLPTSSADDGERRKSAG
SPFWASSLSSSTTGRRVVVGEPGAKTILVLPISTHVPIERFSKTLEAALL
RARHSVRTITSALAASVLGLDEDTYYSGAWCQDNVLLLESWLTQQEEQHE
IVLYQADWEDSEWNRMAAGMADVVLLVANAADQPAIVYLEQKLDPFIRNA
QKLLILLHINPGPYHTPTGTRLWIESRVGIQQHYHVRMHTQSVQFDQQHI
RSDFARLGRILTGTAVGLVLGGGGARGMAHLGLLRVLEEEGIPIDHIVGV
SIGAFIGGLYAKHSSYLEILPFASRFAQNMSSTWLFIKDFTLPFTSYFNG
YSFGRELEKAFGDTKIEDCWLSFACLTVDLSVSRERVHQNGTLWRYVRGS
MTLAGLLPPLCDVDPKDDAVHYLVDGGYVNNLPADVMKEVFSAETTIACD
IGVDVTMTGRQDYGDTLTGLQVLLHGMSPAWARGGMAGTLKAPSMGEISS
QLMYVHSVQQLERAKETIDCYLRPPVTHFGIMDWKRHAELQSLGYLYCRD
SIRAWREALKKEKDGRGASSAFRVVTGAAGDHLIRGRSLSALDDYNLS
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Synonyms
Publications